Role of de novo DNA methyltransferases and methyl CpG-binding proteins in gene silencing in a rat hepatoma (Q28572444)

Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine

title

Role of de novo DNA methyltransferases and methyl CpG-binding proteins in gene silencing in a rat hepatoma (English)

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31 January 2017

hepatocellular carcinoma

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1 reference

Sarmila Majumder

1

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31 January 2017

Kalpana Ghoshal

2

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31 January 2017

Jharna Datta

3

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31 January 2017

Shoumei Bai

4

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31 January 2017

Xiaocheng Dong

5

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31 January 2017

Ning Quan

6

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31 January 2017

Christoph Plass

7

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31 January 2017

Samson T. Jacob

Journal of Biological Chemistry

8

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31 January 2017

language of work or name

English

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publication date

3 May 2002

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31 January 2017

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31 January 2017

277

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31 January 2017

18

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31 January 2017

16048–16058

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31 January 2017

Global methylation profiling of lung cancer identifies novel methylated genes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Solution structure of the methyl-CpG binding domain of human MBD1 in complex with methylated DNA

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Dnmt3a binds deacetylases and is recruited by a sequence-specific repressor to silence transcription

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

The solution structure of the domain from MeCP2 that binds to methylated DNA

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

MBD2 is a transcriptional repressor belonging to the MeCP1 histone deacetylase complex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

The human DNA methyltransferases (DNMTs) 1, 3a and 3b: coordinate mRNA expression in normal tissues and overexpression in tumors

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Role of DNA 5-methylcytosine transferase in cell transformation by fos

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Identification and characterization of a family of mammalian methyl-CpG binding proteins

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Rb interacts with histone deacetylase to repress transcription

19 March 2017

1 reference

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The transcription factor MTF-1 is essential for basal and heavy metal-induced metallothionein gene expression

19 March 2017

1 reference

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Induction of a new metallothionein isoform (MT-IV) occurs during differentiation of stratified squamous epithelia

19 March 2017

1 reference

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Tissue-specific in vitro transcription from the mouse albumin promoter

19 March 2017

1 reference

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Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

19 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

19 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

MT-III, a brain-specific member of the metallothionein gene family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Isolation and characterization of the cDNA encoding human DNA methyltransferase

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Methylation-induced repression--belts, braces, and chromatin

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Influenza virus infection induces metallothionein gene expression in the mouse liver and lung by overlapping but distinct molecular mechanisms

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Methyl CpG binding proteins: coupling chromatin architecture to gene regulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Aberrant patterns of DNA methylation, chromatin formation and gene expression in cancer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

5-Methylcytosine DNA glycosylase activity is also present in the human MBD4 (G/T mismatch glycosylase) and in a related avian sequence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Regulation of metallothionein gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Differential mRNA expression of the human DNA methyltransferases (DNMTs) 1, 3a and 3b during the G(0)/G(1) to S phase transition in normal and tumor cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

DNA hypermethylation in tumorigenesis: epigenetics joins genetics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Silencing of metallothionein-I gene in mouse lymphosarcoma cells by methylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Hypermethylation of metallothionein-I promoter and suppression of its induction in cell lines overexpressing the large subunit of Ku protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Roles of cell division and gene transcription in the methylation of CpG islands.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Hypermethylation of the DAP-kinase CpG island is a common alteration in B-cell malignancies.

29 September 2017

1 reference

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Metallothionein induction in response to restraint stress. Transcriptional control, adaptation to stress, and role of glucocorticoid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Overexpression of the large subunit of the protein Ku suppresses metallothionein-I induction by heavy metals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Metallothionein and apoptosis in primary human hepatocellular carcinoma and metastatic adenocarcinoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Gain of chromosome 17 is the most frequent abnormality detected in neuroblastoma by comparative genomic hybridization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Hypermethylation-associated inactivation indicates a tumor suppressor role for p15INK4B.

29 September 2017

1 reference

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Nuclear protein phosphatase 2A dephosphorylates protein kinase A-phosphorylated CREB and regulates CREB transcriptional stimulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Cytidine methylation of regulatory sequences near the pi-class glutathione S-transferase gene accompanies human prostatic carcinogenesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Accurate initiation of rat ribosomal RNA gene transcription using a fractionated nuclear extract from normal liver and a hepatoma

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Thionein (apometallothionein) can modulate DNA binding and transcription activation by zinc finger containing factor Sp1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Zinc transfer from transcription factor IIIA fingers to thionein clusters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

2 Definitions and nomenclature of metallothioneins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

69 Overview of metallothionein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Metallothionein in physiological and physiopathological processes

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Sp1 elements protect a CpG island from de novo methylation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

SOCS-1, a negative regulator of the JAK/STAT pathway, is silenced by methylation in human hepatocellular carcinoma and shows growth-suppression activity

3 June 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Suppression of metallothionein gene expression in a rat hepatoma because of promoter-specific DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111662200

Transcriptional induction of metallothionein-I and -II genes in the livers of Cu,Zn-superoxide dismutase knockout mice.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Analysis of promoter methylation and its role in silencing metallothionein I gene expression in tumor cells

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Identification of Grf1 on mouse chromosome 9 as an imprinted gene by RLGS-M.

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Methylation-associated silencing of the tissue inhibitor of metalloproteinase-3 gene suggest a suppressor role in kidney, brain, and other human cancers.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Inactivation of the DNA repair gene O6-methylguanine-DNA methyltransferase by promoter hypermethylation is a common event in primary human neoplasia

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Down-regulation of metallothionein expression in human and murine hepatocellular tumors: association with the tumor-necrotizing and antineoplastic effects of cadmium in mice.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2241740

Immunohistochemical expression of metallothionein in resected hepatic primary tumors and colorectal carcinoma metastases

27 November 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Phosphorylation of RNA polymerases: specific association of protein kinase NII with RNA polymerase I

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Increased cytosine DNA-methyltransferase activity during colon cancer progression

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

A genetic linkage map of the mouse using an expanded production system of restriction landmark genomic scanning (RLGS Ver.1.8)

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Novel methylation targets in de novo acute myeloid leukemia with prevalence of chromosome 11 loci

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Restriction landmark genome scanning for aberrant methylation in primary refractory and relapsed acute myeloid leukemia; involvement of the WIT-1 gene

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

Comparison of cytosolic and nuclear poly(A) polymerases from rat liver and a hepatoma: structural and immunological properties and response to NI-type protein kinases

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111662200

A heparin-sensitive nuclear protein kinase. Purification, properties, and increased activity in rat hepatoma relative to liver

21 January 2018

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12 December 2020

Extensive DNA methylation spanning the Rb promoter in retinoblastoma tumors

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12 December 2020

Restriction landmark genomic scanning (RLGS-M)-based genome-wide scanning of mouse liver tumors for alterations in DNA methylation status

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12 December 2020

Loss of p73 gene expression in leukemias/lymphomas due to hypermethylation

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12 December 2020