Deubiquitylation of histone H2A activates transcriptional initiation via trans-histone cross-talk with H3K4 di- and trimethylation (Q28585918)

31 January 2017

title

Deubiquitylation of histone H2A activates transcriptional initiation via trans-histone cross-talk with H3K4 di- and trimethylation (English)

1 reference

Ubiquitin specific peptidase 21

31 January 2017

main subject

1 reference

Histone-lysine N-methyltransferase 2C

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

5

Hideki Ohdan

1 reference

31 January 2017

Takeya Nakagawa

1

1 reference

31 January 2017

Takuya Kajitani

2

1 reference

31 January 2017

Shinji Togo

3

1 reference

31 January 2017

Norio Masuko

4

1 reference

31 January 2017

Yoshitaka Hishikawa

6

1 reference

31 January 2017

Takehiko Koji

7

1 reference

31 January 2017

Toshifumi Matsuyama

8

1 reference

31 January 2017

Tsuyoshi Ikura

9

1 reference

31 January 2017

Masami Muramatsu

10

1 reference

31 January 2017

Takashi Ito

11

1 reference

31 January 2017

publication date

1 January 2008

1 reference

31 January 2017

1 reference

31 January 2017

volume

22

1 reference

31 January 2017

issue

1

1 reference

31 January 2017

page(s)

37–49

1 reference

Regulation of cell cycle progression and gene expression by H2A deubiquitination

31 January 2017

cites work

1 reference

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A histone H2A deubiquitinase complex coordinating histone acetylation and H1 dissociation in transcriptional regulation

17 March 2017

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The role of chromatin during transcription

17 March 2017

1 reference

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Chromatin modifications and their function

17 March 2017

1 reference

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Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF

17 March 2017

1 reference

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A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation

17 March 2017

1 reference

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Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Role of histone H2A ubiquitination in Polycomb silencing

17 March 2017

1 reference

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Nucleosomal histone kinase-1 phosphorylates H2A Thr 119 during mitosis in the early Drosophila embryo

17 March 2017

1 reference

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Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B.

17 March 2017

1 reference

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Back to the future with ubiquitin

17 March 2017

1 reference

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Transcription factors in liver development, differentiation, and regeneration

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

17 March 2017

1 reference

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Diversified transcription initiation complexes expand promoter selectivity and tissue-specific gene expression

17 March 2017

2 references

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17 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Histone ubiquitination: a tagging tail unfolds?

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Identification of a novel isopeptidase with dual specificity for ubiquitin- and NEDD8-conjugated proteins

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

The language of covalent histone modifications

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Crystal structure of the nucleosome core particle at 2.8 A resolution

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Isopeptide linkage between nonhistone and histone 2A polypeptides of chromosomal conjugate-protein A24

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Genomic maps and comparative analysis of histone modifications in human and mouse

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

A unified theory of gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Histone modifications in transcriptional regulation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Histone and chromatin cross-talk

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Reversing histone methylation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

The dynamics of chromatin remodeling at promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

The PRETTY FEW SEEDS2 gene encodes an Arabidopsis homeodomain protein that regulates ovule development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Suppression of pathogenicity of Porphyromonas gingivalis by newly developed gingipain inhibitors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Mechanism of liver regeneration after partial hepatectomy using mouse cDNA microarray

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Transcriptional regulation by histone ubiquitination and deubiquitination.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Energy restriction reduces the number of advanced aberrant crypt foci and attenuates the expression of colonic transforming growth factor beta and cyclooxygenase isoforms in Zucker obese (fa/fa) rats

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

The molecular physiology of liver regeneration following partial hepatectomy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Gene silencing: trans-histone regulatory pathway in chromatin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

p300-mediated acetylation facilitates the transfer of histone H2A-H2B dimers from nucleosomes to a histone chaperone.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Liver regeneration 4: transcriptional control of liver regeneration.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Assembly of regularly spaced nucleosome arrays by Drosophila chromatin assembly factor 1 and a 56-kDa histone-binding protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Stability of nucleosomes in native and reconstituted chromatins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Eukaryotic transcription: an interlaced network of transcription factors and chromatin-modifying machines

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

ATP-dependent nucleosome reconfiguration and transcriptional activation from preassembled chromatin templates

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Novel human HALR (MLL3) gene encodes a protein homologous to ALR and to ALL-1 involved in leukemia, and maps to chromosome 7q36 associated with leukemia and developmental defects.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151013

Isolation and characterization of protein A24, a "histone-like" non-histone chromosomal protein

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/18172164

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel

1 reference

https://pubmed.ncbi.nlm.nih.gov/18172164

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification of transcriptional networks during liver regeneration

1 reference

https://pubmed.ncbi.nlm.nih.gov/18172164

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GAD.1609708

1 reference

1 reference

1 reference

1 reference