Community-driven development for computational biology at Sprints, Hackathons and Codefests (Q28650373)

3

0 references

Stian Soiland-Reyes

21

0 references

Richard Holland

Richard Holland

10

0 references

Matúš Kalaš

Matúš Kalaš

11

0 references

Sascha Steinbiss

Sascha Steinbiss

23

0 references

Francesco Strozzi

Francesco Strozzi

18

0 references

Torsten Seemann

Torsten Seemann

19

0 references

Toshiaki Katayama

27

Toshiaki Katayama

0 references

Anthony Travis

Anthony J Travis

25

0 references

Nomi L. Harris

9

Nomi Harris

0 references

Enis Afgan

2

Enis Afgan

0 references

author name string

Steffen Möller

1

0 references

Raoul J P Bonnal

4

0 references

Timothy Booth

5

0 references

John Chilton

6

0 references

Peter J A Cock

7

0 references

Markus Gumbel

8

0 references

László Kaján

12

0 references

Eri Kibukawa

13

0 references

David R Powel

14

0 references

Jacqueline Quinn

16

0 references

Olivier Sallou

17

0 references

Clare Sloggett

20

0 references

William Spooner

22

0 references

Andreas Tille

24

0 references

Roman Guimera

26

0 references

Brad A Chapman

The Bioinformatics Open Source Conference (BOSC) 2013

28

0 references

language of work or name

English

0 references

publication date

2014

0 references

published in

BMC Bioinformatics

0 references

volume

15 Suppl 14

0 references

issue

Suppl 14

0 references

page(s)

S7

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

BioJava: an open-source framework for bioinformatics in 2012

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Bioinformatics meets user-centred design: a perspective

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Community-driven computational biology with Debian Linux

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

BioRuby: bioinformatics software for the Ruby programming language

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Biopython: freely available Python tools for computational molecular biology and bioinformatics

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The Bioperl toolkit: Perl modules for the life sciences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Prokka: rapid prokaryotic genome annotation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Breaking the ice and forging links: the importance of socializing in research

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

GenomeTools: a comprehensive software library for efficient processing of structured genome annotations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Cloud prediction of protein structure and function with PredictProtein for Debian.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The 2013 Nucleic Acids Research Database Issue and the online molecular biology database collection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

LTRsift: a graphical user interface for semi-automatic classification and postprocessing of de novo detected LTR retrotransposons

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

ParsEval: parallel comparison and analysis of gene structure annotations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Assemblathon 1: a competitive assessment of de novo short read assembly methods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Mobyle: a new full web bioinformatics framework

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4255748

Open software for biologists: from famine to feast

3 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25472764

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-15-S14-S7

0 references

DBLP publication ID

journals/bmcbi/MollerABBBCCGHHKKKPPQSSSSSSSTTGKC14

1 reference

DBLP Dataset 2021-01-02