Antibacterial gene transfer across the tree of life (Q28651574)

4

object named as

Anna-Louise Reysenbach

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author name string

Jason A Metcalf

1

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Lisa J Funkhouser-Jones

2

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Kristen Brileya

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

3

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language of work or name

English

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publication date

25 November 2014

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published in

eLife

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volume

3

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cites work

1 reference

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Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote

17 March 2017

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Recurrent horizontal transfer of bacterial toxin genes to eukaryotes

17 March 2017

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17 March 2017

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Selfish genetic elements, genetic conflict, and evolutionary innovation

17 March 2017

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Microbial ecology of the dark ocean above, at, and below the seafloor

17 March 2017

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The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

17 March 2017

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Colonization of subsurface microbial observatories deployed in young ocean crust

17 March 2017

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The structure of a family GH25 lysozyme fromAspergillus fumigatus

17 March 2017

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

17 March 2017

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Genome sequence of the pea aphid Acyrthosiphon pisum

17 March 2017

1 reference

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The crystal structure of a family GH25 lysozyme from Bacillus anthracis implies a neighboring-group catalytic mechanism with retention of anomeric configuration

17 March 2017

1 reference

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Protein structure prediction on the Web: a case study using the Phyre server

17 March 2017

1 reference

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The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

17 March 2017

1 reference

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Horizontal gene transfer in eukaryotic evolution

17 March 2017

1 reference

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Massive Horizontal Gene Transfer in Bdelloid Rotifers

17 March 2017

1 reference

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Wolbachia genome integrated in an insect chromosome: evolution and fate of laterally transferred endosymbiont genes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Genome sequencing and analysis of Aspergillus oryzae

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

ProtTest: selection of best-fit models of protein evolution

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Coexistence of Wolbachia with Buchnera aphidicola and a secondary symbiont in the aphid Cinara cedri

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

MUSCLE: multiple sequence alignment with high accuracy and high throughput

17 March 2017

1 reference

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Phage Lytic Enzyme Cpl-1 as a Novel Antimicrobial for Pneumococcal Bacteremia

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

The rhomboids: a nearly ubiquitous family of intramembrane serine proteases that probably evolved by multiple ancient horizontal gene transfers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Halocins and sulfolobicins: the emerging story of archaeal protein and peptide antibiotics

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations

17 March 2017

1 reference

https://api.crossref.org/works/10.7554/ELIFE.04266

jModelTest 2: more models, new heuristics and parallel computing

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Mesoaciditoga lauensis gen. nov., sp. nov., a moderately thermoacidophilic member of the order Thermotogales from a deep-sea hydrothermal vent

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Diverse antimicrobial interactions of halophilic archaea and bacteria extend over geographical distances and cross the domain barrier

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

How hyperthermophiles adapt to change their lives: DNA exchange in extreme conditions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Exploring the costs of horizontal gene transfer.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Structure and functions of the bacterial microbiota of plants

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Distribution, abundance, and diversity patterns of the thermoacidophilic "deep-sea hydrothermal vent euryarchaeota 2"

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Detection and characterization of Wolbachia infections in natural populations of aphids: is the hidden diversity fully unraveled?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

More than just lysins: peptidoglycan hydrolases tailor the cell wall

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Trends and barriers to lateral gene transfer in prokaryotes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

In vitro destruction of Streptococcus pneumoniae biofilms with bacterial and phage peptidoglycan hydrolases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Phylogeny and evolution of the Archaea: one hundred genomes later

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Ecological and evolutionary interactions in syntrophic methanogenic consortia

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

The archaeal cell envelope

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

3 June 2018

Lateral gene transfer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

The truncated phage lysin CHAP(k) eliminates Staphylococcus aureus in the nares of mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Horizontal gene transfer between bacteria and animals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Ribonucleotide reduction - horizontal transfer of a required function spans all three domains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Bacterial genes in the aphid genome: absence of functional gene transfer from Buchnera to its host

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Search for a 'Tree of Life' in the thicket of the phylogenetic forest

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

The natural history of antibiotics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Identification of multiple independent horizontal gene transfers into poxviruses using a comparative genomics approach

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Bacterial peptidoglycan (murein) hydrolases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Development and application of a suite of polysaccharide-degrading enzymes for analyzing plant cell walls

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Therapeutic effects of bacteriophage Cpl-1 lysin against Streptococcus pneumoniae endocarditis in rats

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Highways of gene sharing in prokaryotes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Lateral gene transfer in eukaryotes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Ancient horizontal gene transfer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Evolution of the DUT gene: horizontal transfer between host and pathogen in all three domains of life

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4241558

Biased gene transfer in microbial evolution.

3 June 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Evolutionary genomics: transdomain gene transfers

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Isolation and characterization of bacteriophage PhiBP from Paenibacillus polymyxa CCM 7400.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Horizontal gene transfer from diverse bacteria to an insect genome enables a tripartite nested mealybug symbiosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Halocins and sulfolobicins: The emerging story of archaeal protein and peptide antibiotics

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Molecular ecology of extremely halophilic Archaea and Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Microbial essentials at hydrothermal vents.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Widespread infection and diverse infection patterns of Wolbachia in Chinese aphids

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

Horizontal Acquisition of Prokaryotic Genes for Eukaryote Functioning and Niche Adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.04266

21 January 2018

Identifiers

DOI

10.7554/ELIFE.04266

1 reference

release_6pisxj4q2bgx5jmangl5zmaare

549983

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/6pisxj4q2bgx5jmangl5zmaare

mapped directly with Wikidata item

24 November 2022

based on heuristic

549983

1 reference

1 reference

1 reference