Multi-locus phylogeny of lethal amanitas: implications for species diversity and historical biogeography (Q28655777)

2

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Li P Tang

3

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Bau Tolgor

4

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Ping Zhang

5

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Zuo H Chen

6

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Zhu L Yang

DNA sequence analyses reveal abundant diversity, endemism and evidence for Asian origin of the porcini mushrooms

7

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language of work or name

English

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publication date

21 June 2014

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published in

BMC Evolutionary Biology

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volume

14

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issue

1

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page(s)

143

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cites work

1 reference

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Molecular phylogenetics of porcini mushrooms (Boletus section Boletus)

17 March 2017

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Comparative chloroplast genomics reveals the evolution of Pinaceae genera and subfamilies

17 March 2017

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The relative ages of ectomycorrhizal mushrooms and their plant hosts estimated using Bayesian relaxed molecular clock analyses

17 March 2017

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Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences

17 March 2017

1 reference

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Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

17 March 2017

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Gene family encoding the major toxins of lethal Amanita mushrooms

17 March 2017

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BEAST: Bayesian evolutionary analysis by sampling trees

17 March 2017

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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

17 March 2017

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4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editing

17 March 2017

1 reference

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Reconstructing the early evolution of Fungi using a six-gene phylogeny

17 March 2017

1 reference

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

17 March 2017

1 reference

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A Beauveria phylogeny inferred from nuclear ITS and EF1-alpha sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs

17 March 2017

1 reference

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Approaching the taxonomic affiliation of unidentified sequences in public databases--an example from the mycorrhizal fungi

17 March 2017

1 reference

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Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)

17 March 2017

1 reference

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MAFFT version 5: improvement in accuracy of multiple sequence alignment

17 March 2017

1 reference

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Patterns in the assembly of temperate forests around the Northern Hemisphere

17 March 2017

1 reference

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

17 March 2017

1 reference

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MrBayes 3: Bayesian phylogenetic inference under mixed models

17 March 2017

1 reference

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Primer3 on the WWW for general users and for biologist programmers

17 March 2017

1 reference

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Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences

17 March 2017

1 reference

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Trends, Rhythms, and Aberrations in Global Climate 65 Ma to Present

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Dating divergences in the Fungal Tree of Life: review and new analyses

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

The irreversible loss of a decomposition pathway marks the single origin of an ectomycorrhizal symbiosis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Amatoxin poisoning: case reports and review of current therapies

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Multigene molecular phylogenetics reveals true morels (Morchella) are especially species-rich in China.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

A global meta-analysis of Tuber ITS rDNA sequences: species diversity, host associations and long-distance dispersal

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Convergent evolution of sequestrate forms in Amanita under Mediterranean climate conditions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Distribution and abundance of the introduced ectomycorrhizal fungus Amanita phalloides in North America.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

The ectomycorrhizal fungus Amanita phalloides was introduced and is expanding its range on the west coast of North America

3 June 2018

1 reference

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3 June 2018

1 reference

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Phyutility: a phyloinformatics tool for trees, alignments and molecular data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Beringian origins and cryptic speciation events in the fly agaric (Amanita muscaria).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Mushroom poisoning: an analysis of the data between 1996 and 2000.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Phylogenetic species recognition and species concepts in fungi

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Detecting morphological convergence in true fungi, using 18S rRNA gene sequence data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Amanita phalloides poisoning and treatment with silibinin in the Australian Capital Territory and New South Wales

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Using heterozygosity to estimate a percentage DNA sequence similarity for environmental species' delimitation across basidiomycete fungi

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Biogeography of Hysterangiales (Phallomycetidae, Basidiomycota).

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Pakaraimaea dipterocarpacea is ectomycorrhizal, indicating an ancient Gondwanaland origin for the ectomycorrhizal habit in Dipterocarpaceae

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Molecular phylogeny and biogeography of the widely distributed Amanita species, A. muscaria and A. pantherina

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Molecular phylogeny of truffles (Pezizales: Terfeziaceae, Tuberaceae) derived from nuclear rDNA sequence analysis

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4094918

Confidence Limits on Phylogenies: an Approach using the Bootstrap

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24950598

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-14-143

1 reference

Dimensions Publication ID

1016352590

0 references

1 reference

1 reference

PubMed publication ID

24950598

1 reference