Pathogens and host immunity in the ancient human oral cavity (Q28660564)

26

0 references

Christian von Mering

27

0 references

Christian Trachsel

4

0 references

Enrico Cappellini

32

Enrico Cappellini

0 references

Rounak Vyas

Rounak Vyas

José Alfredo Samaniego Castruita

3

0 references

José Alfredo Samaniego Castruita

19

0 references

Sarah Fiddyment

Sarah Fiddyment

10

0 references

Domingo C Salazar-García

Domingo C Salazar-García

15

0 references

João F Matias Rodrigues

João F Matias Rodrigues

2

0 references

Christina Warinner

Christina Warinner

1

0 references

Christian D. Kelstrup

Christian D Kelstrup

22

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Camilla Speller

Camilla Speller

11

0 references

Jesper V. Olsen

Jesper V Olsen

23

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Matthew Collins

Matthew J Collins

Marcus Thomas Pius Gilbert

29

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M Thomas P Gilbert

30

0 references

Jessica Hendy

Jessica Hendy

12

0 references

Anita Radini

7

Anita Radini

0 references

Sophy Charlton

Sophy Charlton

13

0 references

Paolo Nanni

Paolo Nanni

24

0 references

Lars H Hansen

Lars H Hansen

18

0 references

author name string

Natallia Shved

5

0 references

Jonas Grossmann

6

0 references

Y Hancock

8

0 references

Raul Y Tito

9

0 references

Hans Ulrich Luder

14

0 references

Elisabeth Eppler

16

0 references

Roger Seiler

17

0 references

Simon Barkow-Oesterreicher

20

0 references

Kai Yik Teoh

21

0 references

Toshihisa Kawai

25

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Cecil M Lewis

28

0 references

Frank Rühli

The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

31

0 references

language of work or name

English

0 references

publication date

April 2014

0 references

published in

Nature Genetics

0 references

volume

46

0 references

issue

4

0 references

page(s)

336-44

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Structure, function and diversity of the healthy human microbiome

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

In-silico human genomics with GeneCards

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Antibiotic resistance is ancient

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Microfossils in calculus demonstrate consumption of plants and cooked foods in Neanderthal diets (Shanidar III, Iraq; Spy I and II, Belgium)

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Functional characterization of the antibiotic resistance reservoir in the human microflora

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Infernal 1.0: inference of RNA alignments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

MEGAN analysis of metagenomic data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

UCHIME improves sensitivity and speed of chimera detection

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Composition and development of oral bacterial communities

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The surface layer of Tannerella forsythia contributes to serum resistance and oral bacterial coaggregation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Neutrophil extracellular traps: is immunity the second function of chromatin?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Management of pharyngeal gonorrhea is crucial to prevent the emergence and spread of antibiotic-resistant Neisseria gonorrhoeae

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Microbiota and dietary interactions: an update to the hygiene hypothesis?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Using QIIME to analyze 16S rRNA gene sequences from microbial communities

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Bayesian community-wide culture-independent microbial source tracking

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The blossoming of plant archaeogenetics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Cardiovascular disease and the role of oral bacteria

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Complete genome sequence of Olsenella uli type strain (VPI D76D-27C)

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Virulence mechanisms of Tannerella forsythia

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Genome sequencing reveals widespread virulence gene exchange among human Neisseria species

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The human oral microbiome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Comparison of neutrophil functions in aggressive and chronic periodontitis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Oral biofilm architecture on natural teeth

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Antimicrobial peptides of the oral cavity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Dietary carbohydrates and dental-systemic diseases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Detection of oral bacteria in cardiovascular specimens

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

ARDB--Antibiotic Resistance Genes Database

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Associations between periodontal diseases and systemic diseases: a review of the inter-relationships and interactions with diabetes, respiratory diseases, cardiovascular diseases and osteoporosis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Toward an ecological classification of soil bacteria.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Tannerella forsythia, a periodontal pathogen entering the genomic era.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

3 June 2018

Periodontal diseases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Role of resistin in obesity, insulin resistance and Type II diabetes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Periodontal microbial ecology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Antigens of bacteria associated with periodontitis.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Variations of Porphyromonas gingivalis fimbriae in relation to microbial pathogenesis.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Oral health and care in the intensive care unit: state of the science

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Host genetic determinants of Neisseria meningitidis infections.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Supragingival calculus: formation and control

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Cytokine-activated endothelial cells delay neutrophil apoptosis in vitro and in vivo. A role for granulocyte/macrophage colony-stimulating factor

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Molecular preservation and isotopy of Mesolithic human finds from the Ofnet cave (Bavaria, Germany).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Are dental diseases examples of ecological catastrophes?

3 June 2018

1 reference

Starch granules, dental calculus and new perspectives on ancient diet

21 January 2018

1 reference

Identification and characterization of the genes encoding a unique surface (S-) layer of Tannerella forsythia

21 January 2018

1 reference

Porphyromonas gingivalis and Escherichia coli lipopolysaccharide causes resistin release from neutrophils

21 January 2018

1 reference

Fat bodies and thin bodies. Cultural, biomedical and market discourses on obesity.

21 January 2018

1 reference

Animal DNA in PCR reagents plagues ancient DNA research

21 January 2018

1 reference

Multi-isotopic analysis reveals individual mobility and diet at the Early Iron Age monumental tumulus of Magdalenenberg, Germany

21 January 2018

1 reference

Early Neolithic diet and animal husbandry: stable isotope evidence from three Linearbandkeramik (LBK) sites in Central Germany

21 January 2018

1 reference

Resolution of the type material of the Asian elephant,Elephas maximusLinnaeus, 1758 (Proboscidea, Elephantidae)

21 January 2018

1 reference

H-score, a mass accuracy driven rescoring approach for improved peptide identification in modification rich samples.

21 January 2018

1 reference

The Osteological Paradox: Problems of Inferring Prehistoric Health from Skeletal Samples [and Comments and Reply]

21 January 2018

1 reference

Paleomicrobiological study in dental calculus: Streptococcus mutans.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3969750

Diet, Status and Decomposition at Weingarten: Trace Element and Isotope Analyses on Early Mediaeval Skeletal Material

27 November 2018

1 reference

Infectious complications of dental and periodontal diseases in the elderly population

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24562188

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Stable Isotope Evidence for Similarities in the Types of Marine Foods Used by Late Mesolithic Humans at Sites Along the Atlantic Coast of Europe

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NG.2906

1 reference

Dimensions Publication ID

1004737256

0 references

1 reference

1 reference

PubMed publication ID

24562188

1 reference