Metabolically active microbial communities in marine sediment under high-CO(2) and low-pH extremes (Q28707994)

Taiki Futagami

6

0 references

Fumio Inagaki

Fumio Inagaki

13

0 references

Antje Boetius

Antje Boetius

12

0 references

Yuki Morono

Yuki Morono

2

0 references

Tetsuro Urabe

10

Tetsuro Urabe

0 references

Michinari Sunamura

5

Michinari Sunamura

0 references

Katsunori Yanagawa

1

Katsunori Yanagawa

0 references

author name string

Matthias Haeckel

4

0 references

Tatsuhiko Hoshino

7

0 references

Takeshi Terada

8

0 references

Ko-Ichi Nakamura

9

0 references

Gregor Rehder

Comparative study of subseafloor microbial community structures in deeply buried coral fossils and sediment matrices from the challenger mound in the porcupine seabight

11

0 references

language of work or name

English

0 references

publication date

March 2013

0 references

published in

The ISME Journal

0 references

volume

7

0 references

issue

3

0 references

page(s)

555-67

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Volcanic carbon dioxide vents show ecosystem effects of ocean acidification

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Methane- and sulfur-metabolizing microbial communities dominate the Lost City hydrothermal field ecosystem

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Permanent carbon dioxide storage in deep-sea sediments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Archaea in coastal marine environments

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing -proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Losers and winners in coral reefs acclimatized to elevated carbon dioxide concentrations

6 April 2017

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2012.124

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

ARB: a software environment for sequence data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Microbial diversity in deep-sea methane seep sediments presented by SSU rRNA gene tag sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Thermophilic anaerobic oxidation of methane by marine microbial consortia

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Archaeal diversity and distribution along thermal and geochemical gradients in hydrothermal sediments at the Yonaguni Knoll IV hydrothermal field in the Southern Okinawa trough

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Anaerobic oxidation of methane: progress with an unknown process

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Discriminative detection and enumeration of microbial life in marine subsurface sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

An anaerobic methane-oxidizing community of ANME-1b archaea in hypersaline Gulf of Mexico sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Lakes of liquid CO2 in the deep sea.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Oxygen Microelectrode That Is Insensitive to Medium Chemical Composition: Use in an Acid Microbial Mat Dominated by Cyanidium caldarium

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Effects of temperature and pressure on sulfate reduction and anaerobic oxidation of methane in hydrothermal sediments of Guaymas Basin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Species-diversity and pattern-diversity in the study of ecological succession.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Estimating the population size for capture-recapture data with unequal catchability

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

A marine microbial consortium apparently mediating anaerobic oxidation of methane

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

In situ fluxes and zonation of microbial activity in surface sediments of the Håkon Mosby Mud Volcano

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

An Amperometric Microsensor for the Determination of H2S in Aquatic Environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

New cell extraction procedure applied to deep subsurface sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

Activity, Distribution, and Diversity of Sulfate Reducers and Other Bacteria in Sediments above Gas Hydrate (Cascadia Margin, Oregon)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

Development of 16S rRNA gene-targeted primers for detection of archaeal anaerobic methanotrophs (ANMEs).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

Environmental regulation of the anaerobic oxidation of methane: a comparison of ANME-I and ANME-II communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

Effects of Direct Ocean CO2 Injection on Deep-Sea Meiofauna

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

Abundance and spatial organization of Gram-negative sulfate-reducing bacteria in activated sludge investigated by in situ probing with specific 16S rRNA targeted oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

A nitrite microsensor for profiling environmental biofilms.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3578575

Venting of carbon dioxide-rich fluid and hydrate formation in mid-okinawa trough backarc basin

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23096400

12 December 2020

inferred from PubMed ID database lookup

Comparison of microbial communities associated with phase-separation-induced hydrothermal fluids at the Yonaguni Knoll IV hydrothermal field, the Southern Okinawa Trough

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23096400

12 December 2020

inferred from PubMed ID database lookup

Methods of Seawater Analysis

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

7 January 2021

inferred from DOI database lookup

Venting of a separate CO2 -rich gas phase from submarine arc volcanoes: Examples from the Mariana and Tonga-Kermadec arcs

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.124

7 January 2021