Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells (Q28714400)

4

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Ruedi Aebersold

5

object named as

Ruedi Aebersold

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Alexander Schmidt

2

object named as

Alexander Schmidt

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author name string

Samuel Marguerat

1

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Sandra Codlin

Global quantification of mammalian gene expression control

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language of work or name

English

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publication date

26 October 2012

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published in

Cell

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volume

151

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issue

3

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page(s)

671-83

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cites work

1 reference

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Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe

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The more the merrier: comparative analysis of microarray studies on cell cycle-regulated genes in fission yeast

7 April 2017

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Design principles of interconnections between chromatin and pre-mRNA splicing

3 June 2018

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Exploring long non-coding RNAs through sequencing

3 June 2018

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Cell biology. The essence of quiescence

3 June 2018

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3 June 2018

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Deep proteome and transcriptome mapping of a human cancer cell line

3 June 2018

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PomBase: a comprehensive online resource for fission yeast

3 June 2018

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Physical limits of cells and proteomes

3 June 2018

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Quantification of mRNA and protein and integration with protein turnover in a bacterium

3 June 2018

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Absolute quantification of microbial proteomes at different states by directed mass spectrometry

3 June 2018

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RNA sequencing reveals two major classes of gene expression levels in metazoan cells

3 June 2018

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Quantitative, high-resolution proteomics for data-driven systems biology

3 June 2018

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Specific biomarkers for stochastic division patterns and starvation-induced quiescence under limited glucose levels in fission yeast

3 June 2018

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3 June 2018

Comprehensive proteomics

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The other lives of ribosomal proteins

3 June 2018

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Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.

3 June 2018

1 reference

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RNAi-dependent formation of heterochromatin and its diverse functions

3 June 2018

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The nuclear poly(A)-binding protein interacts with the exosome to promote synthesis of noncoding small nucleolar RNAs

3 June 2018

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Coexistence of quiescent and active adult stem cells in mammals

3 June 2018

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A guided tour of the Trans-Proteomic Pipeline

3 June 2018

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An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

3 June 2018

1 reference

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A model for all genomes: the role of transcription factories

3 June 2018

1 reference

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Cellular quiescence: are controlling genes conserved?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

A single molecule view of gene expression.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

A complex gene regulatory mechanism that operates at the nexus of multiple RNA processing decisions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Absolute quantification of the budding yeast transcriptome by means of competitive PCR between genomic and complementary DNAs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Biphasic incorporation of centromeric histone CENP-A in fission yeast

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Molecular mechanisms underlying the mitosis-meiosis decision

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Two-step, extensive alterations in the transcriptome from G0 arrest to cell division in Schizosaccharomyces pombe

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

A network of multiple regulatory layers shapes gene expression in fission yeast.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Comparative proteomic and transcriptomic profiling of the fission yeast Schizosaccharomyces pombe

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Global roles of Ste11p, cell type, and pheromone in the control of gene expression during early sexual differentiation in fission yeast.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Global transcriptional responses of fission yeast to environmental stress

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

General statistics of stochastic process of gene expression in eukaryotic cells.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

The protein responsible for the repeating structure of cytoplasmic poly(A)-ribonucleoprotein

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

A coordinated global control over cellular transcription.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Transcriptional regulatory network for sexual differentiation in fission yeast

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Counting cytokinesis proteins globally and locally in fission yeast.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Periodic gene expression program of the fission yeast cell cycle.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

Zipf's law in gene expression.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

The transcriptional program of meiosis and sporulation in fission yeast.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

The S. pombe aurora-related kinase Ark1 associates with mitotic structures in a stage dependent manner and is required for chromosome segregation.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3482660

mik1(+) G1-S transcription regulates mitotic entry in fission yeast

27 November 2018

1 reference

12 December 2020

Meta-analysis of genome regulation and expression variability across hundreds of environmental and genetic perturbations in fission yeast

1 reference

12 December 2020

RNA elimination machinery targeting meiotic mRNAs promotes facultative heterochromatin formation

1 reference

12 December 2020

Ribosome Numbers in a Fission Yeast

1 reference

12 December 2020

10.1016/J.CELL.2012.09.019

Identifiers

DOI

1 reference

1 reference

1 reference

PubMed publication ID

23101633

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