Genetic structure and contrasting selection pattern at two major histocompatibility complex genes in wild house mouse populations (Q28744275)

1

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J Gouy de Bellocq

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S J E Baird

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J Piálek

4

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J Bryja

Arlequin (version 3.0): an integrated software package for population genetics data analysis

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language of work or name

English

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publication date

May 2011

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published in

Heredity

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volume

106

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page(s)

727-40

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issue

5

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Genetic conflict outweighs heterogametic incompatibility in the mouse hybrid zone?

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Not so different after all: a comparison of methods for detecting amino acid sites under selection

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Crystal structures of two I-Ad-peptide complexes reveal that high affinity can be achieved without large anchor residues

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Crystal structure of I-Ak in complex with a dominant epitope of lysozyme

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Ancestral polymorphism of Mhc class II genes in mice: implications for balancing selection and the mammalian molecular clock

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Structures of an MHC class II molecule with covalently bound single peptides

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

HyPhy: hypothesis testing using phylogenies

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Extremely high MHC class I variation in a population of a long-distance migrant, the Scarlet Rosefinch (Carpodacus erythrinus).

23 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Contrasting patterns of variation in MHC loci in the Alpine newt

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

MHC, TSP, and the origin of species: from immunogenetics to evolutionary genetics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

The spectrum of HLA-DQ and HLA-DR alleles, 2006: a listing correlating sequence and structure with function

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Evaluation of six methods for estimating synonymous and nonsynonymous substitution rates

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Duplication, balancing selection and trans-species evolution explain the high levels of polymorphism of the DQA MHC class II gene in voles (Arvicolinae).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Estimating diversifying selection and functional constraint in the presence of recombination

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Sequence diversity of the MHC DRB gene in the Eurasian beaver (Castor fiber).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

The evolutionary ecology of the major histocompatibility complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Gene duplication and the origin of novel proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Perspective: detecting adaptive molecular polymorphism: lessons from the MHC

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Effects of habitat fragmentation and changes of dispersal behaviour after a recent population decline on the genetic variability of noncoding and coding DNA of a monogamous Malagasy rodent

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Wild mice: an ever-increasing contribution to a popular mammalian model.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Consequences of population structure on genes under balancing selection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Evolution by the birth-and-death process in multigene families of the vertebrate immune system

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

H-2 polymorphisms are more uniformly distributed than allozyme polymorphisms in natural populations of house mice.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

A highly polymorphic microsatellite in the class II Eb gene allows tracing of major histocompatibility complex evolution in mouse

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

The molecular descent of the major histocompatibility complex.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Influence of viral superantigens on V beta- and V alpha-specific positive and negative selection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Biochemical comparison of major histocompatibility complex molecules from different subspecies of Mus musculus: evidence for trans-specific evolution of alleles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Histocompatibility-2 system in wild mice. X. Frequencies of H-2 and Ia antigens in wild mice from Europe and Africa

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

The mouse E beta 2 gene: a class II MHC beta gene with limited intraspecies polymorphism and an unusual pattern of transcription

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Accelerated evolution in the reactive centre regions of serine protease inhibitors.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Origin of major histocompatibility complex polymorphism: the trans-species hypothesis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Major histocompatibility complex gene organization in the mole rat Spalax ehrenbergi: evidence for transfer of function between class II genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

High frequency of H-2E0 alleles among wild mice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Molecular basis for the defective expression of the mouse Ew17 beta gene.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Revised nomenclature of mouse H-2 genes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Class II Mhc genes in rodent evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Characterization of the molecular defects in the mouse E beta f and E beta q genes. Implications for the origin of MHC polymorphism.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Polymorphism and balancing selection at major histocompatibility complex loci

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Evaluation of the functional equivalence of major histocompatibility complex class II A and E complexes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

3 June 2018

Analysis of Hybrid Zones

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

First occurrence of the house mouse (Mus musculus domesticus Schwarz & Schwarz, 1943) in the Western Mediterranean: a zooarchaeological revision of subfossil occurrences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

PERSPECTIVE: HIGHLY VARIABLE LOCI AND THEIR INTERPRETATION IN EVOLUTION AND CONSERVATION.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Convergent evolution of major histocompatibility complex molecules in humans and New World monkeys

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Using the AMOVA framework to estimate a standardized genetic differentiation measure

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Evolution of MHC-DRB class II polymorphism in the genus Apodemus and a comparison of DRB sequences within the family Muridae (Mammalia: Rodentia).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

A genetic algorithm approach to detecting lineage-specific variation in selection pressure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Automated phylogenetic detection of recombination using a genetic algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Inactivation of E alpha and E beta expression in inbred and wild mice by multiple distinct mutations, some of which predate speciation within Mus species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Multiple parasites mediate balancing selection at two MHC class II genes in the fossorial water vole: insights from multivariate analyses and population genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Analysis of major histocompatibility complex class II gene in water voles using capillary electrophoresis-single stranded conformation polymorphism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Relative roles of mutation and recombination in generating allelic polymorphism at an MHC class II locus in Peromyscus maniculatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Complete loss of MHC genetic diversity in the Common Hamster (Cricetus cricetus) population in The Netherlands. Consequences for conservation strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

GENETIC ANALYSIS OF AUTOSOMAL AND X-LINKED MARKERS ACROSS A MOUSE HYBRID ZONE

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

Development of Unique House Mouse Resources Suitable for Evolutionary Studies of Speciation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Nomenclature for the major histocompatibility complexes of different species: a proposal.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3186229

Evolutionary lineages of RT1.Ba in the Australian Rattus

27 November 2018

1 reference

12 December 2020

Origins and divergence times of mammalian class II MHC gene clusters

1 reference

12 December 2020

Genetic variation of microsatellite loci in the major histocompatibility complex (MHC) region in the southeast Asian house mouse (Mus musculus castaneus)

1 reference

12 December 2020

A standardized genetic differentiation measure

1 reference

12 December 2020

MHC-DRB3 variation in a free-living population of the European bison, Bison bonasus

1 reference

12 December 2020

Selection on MHC: a matter of form over function

1 reference

12 December 2020

Characterization, Polymorphism, and Evolution of MHC Class II B Genes in Birds of Prey

1 reference

12 December 2020

Evolutionary relationships of class II major-histocompatibility-complex genes in mammals

1 reference

12 December 2020

ABRUPT CLINE FOR SEX CHROMOSOMES IN A HYBRID ZONE BETWEEN TWO SPECIES OF MICE.

1 reference

12 December 2020

Nucleotide sequence analysis of class II genes borne by mouse t chromosomes

1 reference

12 December 2020

Selection, convergence, and intragenic recombination in HLA diversity

1 reference

12 December 2020

Analysis of Hybrid Zones

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

7 January 2021

inferred from DOI database lookup

Inferences of selection and migration in the Danish house mouse hybrid zone

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

7 January 2021

inferred from DOI database lookup

GENEPOP (Version 1.2): Population Genetics Software for Exact Tests and Ecumenicism

1 reference

https://api.crossref.org/works/10.1038%2FHDY.2010.112

7 January 2021