Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea (Q28744688)

2

object named as

Matthias Labrenz

0 references

Klaus Jürgens

3

object named as

Klaus Jürgens

0 references

author name string

Daniel Pr Herlemann

1

0 references

Joanna J Waniek

5

0 references

Anders F Andersson

Removing noise from pyrosequenced amplicons

6

0 references

language of work or name

English

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publication date

October 2011

0 references

published in

The ISME Journal

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volume

5

0 references

page(s)

1571-9

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issue

10

0 references

cites work

1 reference

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Status of biodiversity in the Baltic Sea

16 March 2017

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It's all relative: ranking the diversity of aquatic bacterial communities

16 March 2017

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16 March 2017

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

16 March 2017

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

16 March 2017

1 reference

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New insights into metabolic properties of marine bacteria encoding proteorhodopsins

16 March 2017

1 reference

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Roseisalinus antarcticus gen. nov., sp. nov., a novel aerobic bacteriochlorophyll a-producing alpha-proteobacterium isolated from hypersaline Ekho Lake, Antarctica

16 March 2017

1 reference

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Proposal of Pseudorhodobacter ferrugineus gen nov, comb nov, for a non-photosynthetic marine bacterium, Agrobacterium ferrugineum, related to the genus Rhodobacter

16 March 2017

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

16 March 2017

1 reference

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

16 March 2017

1 reference

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Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

7 April 2017

1 reference

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ARB: a software environment for sequence data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

A guide to the natural history of freshwater lake bacteria

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Principal processes within the estuarine salinity gradient: a review

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Development of a 16S rRNA-targeted probe set for Verrucomicrobia and its application for fluorescence in situ hybridization in a humic lake

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Comparative analysis of human gut microbiota by barcoded pyrosequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Global patterns in bacterial diversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Global patterns of diversity and community structure in marine bacterioplankton.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Proteorhodopsin in the ubiquitous marine bacterium SAR11.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Fine-scale phylogenetic architecture of a complex bacterial community.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia river, its estuary, and the adjacent coastal ocean.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Bias in template-to-product ratios in multitemplate PCR

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Bacterial diversity among small-subunit rRNA gene clones and cellular isolates from the same seawater sample

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3176514

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.41

Biodiversity and Adaptive Mechanisms in Brackish Water Fauna

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.41

Quantifying the roles of immigration and chance in shaping prokaryote community structure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.41

Vertical mixing in the Baltic Sea and consequences for eutrophication – A review

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.41

Darss Sill as a biological border in the fossil record of the Baltic Sea: evidence from diatoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.41

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2011.41

1 reference

Dimensions Publication ID

757308

1029280259

0 references

757308

1 reference

1 reference

1 reference