Genome scan to detect genetic structure and adaptive genes of natural populations of Cryptomeria japonica (Q28757201)

2

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Tomokazu Takahashi

3

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Naoki Tani

4

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Tokuko Ujino-Ihara

5

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Hiroyoshi Iwata

EVOLUTION IN MENDELIAN POPULATIONS

6

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language of work or name

English

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publication date

August 2007

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published in

Genetics

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volume

176

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issue

4

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page(s)

2393-403

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cites work

1 reference

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Inference of population structure using multilocus genotype data

16 March 2017

1 reference

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

16 March 2017

1 reference

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A test of neutral molecular evolution based on nucleotide data

16 March 2017

1 reference

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Adaptive protein evolution at the Adh locus in Drosophila

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data

16 March 2017

1 reference

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The detection of disease clustering and a generalized regression approach

16 March 2017

1 reference

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Estimation of average heterozygosity and genetic distance from a small number of individuals

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Analysis of Gene Diversity in Subdivided Populations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Glacial refugia: hotspots but not melting pots of genetic diversity

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Comparative analysis of expressed sequence tags of conifers and angiosperms reveals sequences specifically conserved in conifers

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Using genome scans of DNA polymorphism to infer adaptive population divergence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. and Q. petraea (Matt.) Liebl.].

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

A consensus linkage map for sugi (Cryptomeria japonica) from two pedigrees, based on microsatellites and expressed sequence tags.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Interpretation of variation across marker loci as evidence of selection.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Expression analysis of ESts derived from the inner bark of Cryptomeria japonica

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower species

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

New statistical tests of neutrality for DNA samples from a population.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Correlations, descent measures: drift with migration and mutation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

The coalescent process in models with selection and recombination

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

F-statistics and analysis of gene diversity in subdivided populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Microsatellite markers reveal high allelic variation in natural populations of Cryptomeria japonica near refugial areas of the last glacial period

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Expressed Sequence Tag-Linked Microsatellites as a Source of Gene-Associated Polymorphisms for Detecting Signatures of Divergent Selection in Atlantic Salmon (Salmo salar L.)

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

DetSel 1.0: a computer program to detect markers responding to selection.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Expected linkage disequilibrium for a neutral locus linked to a chromosomal arrangement.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1950640

Estimation of fixation indices and gene diversities

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565947

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetic diversity and the genetic structure of natural populations of Chamaecyparis obtusa: implications for management and conservation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565947

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular phytogeny of conifers using RFLP analysis of PCR-amplified specific chloroplast genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17565947