Life Sciences and the web: a new era for collaboration (Q28757403)

Europe PubMed Central

28 August 2020

7 April 2021

Life Sciences and the web: a new era for collaboration (English)

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28 August 2020

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7 April 2021

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research collaboration

1 reference

5

Thomas S Deisboeck

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author name string

Jonathan A Sagotsky

1

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Le Zhang

2

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Zhihui Wang

3

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Sean Martin

Molecular Systems Biology

4

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language of work or name

English

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publication date

2008

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1 July 2008

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28 August 2020

7 April 2021

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28 August 2020

7 April 2021

4

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page(s)

201

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copyright license

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

2 references

Europe PubMed Central

28 August 2020

LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics

Europe PubMed Central

7 April 2021

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1 reference

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Advancing translational research with the Semantic Web

16 March 2017

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Sharing Detailed Research Data Is Associated with Increased Citation Rate

16 March 2017

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Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL

16 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Key biology databases go wiki

16 March 2017

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Genome re-annotation: a wiki solution?

16 March 2017

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Publishing perishing? Towards tomorrow's information architecture

16 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

BioMoby extensions to the Taverna workflow management and enactment software

16 March 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

STRING 7--recent developments in the integration and prediction of protein interactions

16 March 2017

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Wikis, blogs and podcasts: a new generation of Web-based tools for virtual collaborative clinical practice and education

16 March 2017

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Information retrieval and knowledge discovery utilising a biomedical Semantic Web

16 March 2017

1 reference

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From XML to RDF: how semantic web technologies will change the design of 'omic' standards

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Taverna: a tool for the composition and enactment of bioinformatics workflows

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Publishing on the semantic web

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Gene ontology: tool for the unification of biology

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Advancing cancer systems biology: introducing the Center for the Development of a Virtual Tumor, CViT.

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Characteristics of cancer blog users

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

AVIS: AJAX viewer of interactive signaling networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

OntologyWidget - a reusable, embeddable widget for easily locating ontology terms

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

The effect of Web 2.0 on the future of medical practice and education: Darwikinian evolution or folksonomic revolution?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

AlzPharm: integration of neurodegeneration data using RDF.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Boca: an open-source RDF store for building Semantic Web applications

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Scientists enter the blogosphere

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

The increasing dominance of teams in production of knowledge

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

The emerging Web 2.0 social software: an enabling suite of sociable technologies in health and health care education

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Using web ontology language to integrate heterogeneous databases in the neurosciences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Open-source software for radiologists: a primer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

BioDash: a Semantic Web dashboard for drug development

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Technical development of PubMed interact: an improved interface for MEDLINE/PubMed searches

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

A framework based on Web service orchestration for bioinformatics workflow management

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Bioinformatics visualization and integration with open standards: the Bluejay genomic browser.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

YeastHub: a semantic web use case for integrating data in the life sciences domain

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Physician use of patient-centered weblogs and online journals

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

BioMOBY successfully integrates distributed heterogeneous bioinformatics Web Services. The PlaNet exemplar case

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

A life science Semantic Web: are we there yet?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Globally distributed object identification for biological knowledgebases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Protégé-2000: an open-source ontology-development and knowledge-acquisition environment.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Communication. Science and the semantic web.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.39

Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.39

Mining Taverna's semantic web of provenance

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.39

REMORA: a pilot in the ocean of BioMoby web-services

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.39

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2516361

Buprenorphine and HIV primary care: report of a forum for collaborative HIV research workshop

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18594519

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Coming soon: a global grid for cancer research

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18594519

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Overcoming policy and financing barriers to integrated buprenorphine and HIV primary care

1 reference

https://api.crossref.org/works/10.1038%2FMSB.2008.39