Genomic characterization of recent human LINE-1 insertions: evidence supporting random insertion (Q28776429)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11731495%20AND%20SRC:MED&resulttype=core&format=json

4 December 2019

title

Genomic characterization of recent human LINE-1 insertions: evidence supporting random insertion (English)

1 reference

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4 December 2019

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2

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4 December 2019

author name string

I Ovchinnikov

series ordinal

1

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4 December 2019

G D Swergold

series ordinal

3

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4 December 2019

language of work or name

English

0 references

publication date

1 December 2001

1 reference

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4 December 2019

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4 December 2019

volume

11

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4 December 2019

issue

12

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4 December 2019

page(s)

2050-2058

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Initial sequencing and analysis of the human genome

4 December 2019

cites work

1 reference

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Reading between the LINEs: human genomic variation induced by LINE-1 retrotransposition

16 March 2017

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Molecular evidence for a relationship between LINE-1 elements and X chromosome inactivation: the Lyon repeat hypothesis

16 March 2017

1 reference

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Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition

16 March 2017

1 reference

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16 March 2017

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16 March 2017

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Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

6 April 2017

1 reference

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Basic local alignment search tool

16 March 2017

1 reference

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High frequency retrotransposition in cultured mammalian cells

16 March 2017

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Exon shuffling by L1 retrotransposition

7 April 2017

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Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

7 April 2017

1 reference

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Frequent human genomic DNA transduction driven by LINE-1 retrotransposition

9 May 2017

1 reference

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Transduction of 3'-flanking sequences is common in L1 retrotransposition

3 June 2018

1 reference

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Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

3 June 2018

1 reference

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The age and evolution of non-LTR retrotransposable elements

3 June 2018

1 reference

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High-resolution cartography of recently integrated human chromosome 19-specific Alu fossils

3 June 2018

1 reference

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Many human L1 elements are capable of retrotransposition

3 June 2018

1 reference

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The origin of interspersed repeats in the human genome

3 June 2018

1 reference

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Alu repeats: a source for the genesis of primate microsatellites.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Two additional potential retrotransposons isolated from a human L1 subfamily that contains an active retrotransposable element

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Insertion of a 5' truncated L1 element into the 3' end of exon 44 of the dystrophin gene resulted in skipping of the exon during splicing in a case of Duchenne muscular dystrophy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

A new retrotransposable human L1 element from the LRE2 locus on chromosome 1q produces a chimaeric insertion

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

A family of long reiterated DNA sequences, one copy of which is next to the human beta globin gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Defining the beginning and end of KpnI family segments

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Human genome organization: Alu, LINES, and the molecular structure of metaphase chromosome bands

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Insertion and/or deletion of many repeated DNA sequences in human and higher ape evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Functional expression of a sequence-specific endonuclease encoded by the retrotransposon R2Bm

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man.

3 June 2018

1 reference

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The distribution of interspersed repetitive DNA sequences in the human genome

3 June 2018

1 reference

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Unit-length line-1 transcripts in human teratocarcinoma cells

3 June 2018

1 reference

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Differential distribution of long and short interspersed element sequences in the mouse genome: chromosome karyotyping by fluorescence in situ hybridization

3 June 2018

1 reference

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Isolation of an active human transposable element

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Targeting of human retrotransposon integration is directed by the specificity of the L1 endonuclease for regions of unusual DNA structure.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

The molecular basis of chronic granulomatous disease

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Insertional mutation by transposable element, L1, in the DMD gene results in X-linked dilated cardiomyopathy.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311227

Selection against deleterious LINE-1-containing loci in the human lineage

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11731495

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comparison of chromosomal distribution of a retroposon (LINE) and a retrovirus-like element mys in Peromyscus maniculatus and P. leucopus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11731495

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

L1 (LINE-1) retrotransposon evolution and amplification in recent human history

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11731495

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.194701

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11731495%20AND%20SRC:MED&resulttype=core&format=json

4 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11731495%20AND%20SRC:MED&resulttype=core&format=json

4 December 2019

1 reference