Oxidative release of natural glycans for functional glycomics (Q28829624)

2

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Yi Lasanajak

3

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Matthew R Kudelka

4

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David F Smith

5

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Richard D Cummings

Printed covalent glycan array for ligand profiling of diverse glycan binding proteins

6

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language of work or name

English

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publication date

June 2016

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published in

Nature Methods

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volume

13

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issue

6

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page(s)

528-34

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cites work

1 reference

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Human milk contains novel glycans that are potential decoy receptors for neonatal rotaviruses

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Shotgun glycomics of pig lung identifies natural endogenous receptors for influenza viruses.

3 June 2018

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Novel cleavage of reductively aminated glycan-tags by N-bromosuccinimide to regenerate free, reducing glycans

3 June 2018

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Design and synthesis of glycoprotein-based multivalent glyco-ligands for influenza hemagglutinin and human galectin-3.

3 June 2018

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Functional glycomic analysis of human milk glycans reveals the presence of virus receptors and embryonic stem cell biomarkers

3 June 2018

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The proteoglycan bikunin has a defined sequence

3 June 2018

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Glycan microarrays for decoding the glycome

3 June 2018

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Shotgun glycomics: a microarray strategy for functional glycomics

3 June 2018

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Use of Glycan Microarrays to Explore Specificity of Glycan-Binding Proteins

3 June 2018

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The N-Glycome of Human Plasma

3 June 2018

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Glycan labeling strategies and their use in identification and quantification.

3 June 2018

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Chemical and enzymatic N-glycan release comparison for N-glycan profiling of monoclonal antibodies expressed in plants

3 June 2018

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The repertoire of glycan determinants in the human glycome

3 June 2018

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Generation of a natural glycan microarray using 9-fluorenylmethyl chloroformate (FmocCl) as a cleavable fluorescent tag

3 June 2018

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Fluorescent glycosylamides produced by microscale derivatization of free glycans for natural glycan microarrays

3 June 2018

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Glycan reductive isotope labeling for quantitative glycomics

3 June 2018

1 reference

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The high mannose glycans from bovine ribonuclease B isomer characterization by ion trap MS

3 June 2018

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New principles for glycoside-bond formation

3 June 2018

1 reference

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Novel fluorescent glycan microarray strategy reveals ligands for galectins

3 June 2018

1 reference

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Mass spectrometry and the emerging field of glycomics

3 June 2018

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Recent developments in synthetic oligosaccharide-based bacterial vaccines

3 June 2018

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General microarray technique for immobilization and screening of natural glycans

3 June 2018

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Quantifiable fluorescent glycan microarrays

3 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Tools for glycomics: relative quantitation of glycans by isotopic permethylation using 13CH3I.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Identification of ligand specificities for glycan-binding proteins using glycan arrays

3 June 2018

1 reference

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Enzymatic synthesis of oligosaccharides and neoglycoconjugates

3 June 2018

1 reference

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Sweet spots in functional glycomics

3 June 2018

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Versatile fluorescent derivatization of glycans for glycomic analysis

3 June 2018

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Derivatization for stabilizing sialic acids in MALDI-MS.

3 June 2018

1 reference

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Oxidation of heparan sulphate by hypochlorite: role of N-chloro derivatives and dichloramine-dependent fragmentation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Recent developments in oligosaccharide synthesis: tactics, solid-phase synthesis and library synthesis.

3 June 2018

1 reference

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Microscale nonreductive release of O-linked glycans for subsequent analysis through MALDI mass spectrometry and capillary electrophoresis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Solubilization of yeast cell-wall beta-(1-->3)-D-glucan by sodium hypochlorite oxidation and dimethyl sulfoxide extraction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Identification of highly fucosylated N-linked oligosaccharides from the human parotid gland.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Hypochlorite-induced damage to proteins: formation of nitrogen-centred radicals from lysine residues and their role in protein fragmentation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Hypochlorous acid interactions with thiols, nucleotides, DNA, and other biological substrates

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Chlorination studies. II. The reaction of aqueous hypochlorous acid with alpha-amino acids and dipeptides

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

A novel glycosphingolipid-degrading enzyme cleaves the linkage between the oligosaccharide and ceramide of neutral and acidic glycosphingolipids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

HPLC-based analysis of serum N-glycans on a 96-well plate platform with dedicated database software.

3 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Analysis of oligosaccharides derived from heparin by ion-pair reversed-phase chromatography/mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Automated carbohydrate synthesis to drive chemical glycomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Chlorination studies II. The reaction of aqueous hypochlorous acid with α-amino acids and dipeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Prompt chemoenzymatic synthesis of diverse complex-type oligosaccharides and its application to the solid-phase synthesis of a glycopeptide with Asn-linked sialyl-undeca- and asialo-nonasaccharides

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Structural analysis of glycans by NMR chemical shift prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Enzymatic/chemical release of O-glycans allowing MS analysis at high sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Hypochlorite-Mediated Fragmentation of Hyaluronan, Chondroitin Sulfates, and RelatedN-Acetyl Glycosamines: Evidence for Chloramide Intermediates, Free Radical Transfer Reactions, and Site-Specific Fragmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Heparan sulfate degradation via reductive homolysis of its N-chloro derivatives

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Glycan profiling of urine, amniotic fluid and ascitic fluid from galactosialidosis patients reveals novel oligosaccharides with reducing end hexose and aldohexonic acid residues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.3861

Mass spectrometric O-glycan analysis after combined O-glycan release by beta-elimination and 1-phenyl-3-methyl-5-pyrazolone labeling.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4887297

Glycan microarray technologies: tools to survey host specificity of influenza viruses.

26 November 2018

1 reference

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Purification and characterization of membrane-bound endoglycoceramidase from Corynebacterium sp

26 November 2018

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12 December 2020

Hydrazinolysis of α1-acid glycoprotein

1 reference

12 December 2020

THE ISOLATION OF THE SUGAR PORTION OF GLYCOSPHINGOLIPIDS BY OZONOLYSIS AND FRAGMENTATION

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12 December 2020

Reductive and catalytic monoalkylation of primary amines using nitriles as an alkylating reagent

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12 December 2020

A comprehensive procedure for preparation of partially methylated alditol acetates from glycoprotein carbohydrates

1 reference

12 December 2020

Purification of the oligosaccharide-cleaving enzymes of Flavobacterium meningosepticum

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12 December 2020

Effect and limitation of excess ammonium on the release of O-glycans in reducing forms from glycoproteins under mild alkaline conditions for glycomic and functional analysis

1 reference

12 December 2020

Detailed studies on substrate structure requirements of glycoamidases A and F

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12 December 2020

Transglycosylation activity of Mucor hiemalis endo-beta-N-acetyl-glucosaminidase which transfers complex oligosaccharides to the N-acetylglucosamine moieties of peptides

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12 December 2020

Release of carbohydrates from sphingoglycolipid by osmium-catalyzed periodate oxidation followed by treatment with mild alkali

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12 December 2020

A practical approach to N-glycan production by hydrazinolysis using hydrazine monohydrate

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12 December 2020

Isolation of glycosphingolipids

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12 December 2020

Reductive monoalkylation of aromatic and aliphatic nitro compounds and the corresponding amines with nitriles

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12 December 2020

One-pot nonreductive O-glycan release and labeling with 1-phenyl-3-methyl-5-pyrazolone followed by ESI-MS analysis

1 reference

12 December 2020

Endoglycoceramidase from Rhodococcus species G-74-2

1 reference

12 December 2020

Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase F cannot release glycans with fucose attached alpha 1----3 to the asparagine-linked N-acetylglucosamine residue

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12 December 2020

Long-lived oxidants generated by human neutrophils: characterization and bioactivity

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12 December 2020

Nonenzymatic release of free reducing glycans from glycosphingolipids

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12 December 2020

Identifiers

DOI

10.1038/NMETH.3861

1 reference

Dimensions Publication ID

1038755177

0 references

1 reference

1 reference

PubMed publication ID

27135973

1 reference