Empirical Bayes analysis of RNA-seq data for detection of gene expression heterosis (Q28959158)

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3 April 2020

title

Empirical Bayes analysis of RNA-seq data for detection of gene expression heterosis (English)

1 reference

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3 April 2020

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1 reference

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3

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3 April 2020

Dan Nettleton

series ordinal

4

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3 April 2020

author name string

Jarad Niemi

series ordinal

1

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3 April 2020

Eric Mittman

series ordinal

2

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3 April 2020

language of work or name

English

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publication date

1 December 2015

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json

Journal of Agricultural, Biological, and Environmental Statistics

3 April 2020

published in

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3 April 2020

volume

20

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3 April 2020

issue

4

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3 April 2020

page(s)

614-628

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maintained by WikiProject

3 April 2020

WikiProject Mathematics

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cites work

Genomic and epigenetic insights into the molecular bases of heterosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

A scaling normalization method for differential expression analysis of RNA-seq data

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Allelic variation and heterosis in maize: how do two halves make more than a whole?

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Bioconductor: open software development for computational biology and bioinformatics

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Estimation and Testing of Gene Expression Heterosis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

A computational workflow to identify allele-specific expression and epigenetic modification in maize

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

RNA-seq analysis of allele-specific expression, hybrid effects, and regulatory divergence in hybrids compared with their parents from natural populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

baySeq: empirical Bayesian methods for identifying differential expression in sequence count data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Moderated statistical tests for assessing differences in tag abundance

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

All possible modes of gene action are observed in a global comparison of gene expression in a maize F1 hybrid and its inbred parents

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4852395

Inference from Iterative Simulation Using Multiple Sequences

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS13253-015-0230-5

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13253-015-0230-5

10.1007/S13253-015-0230-5

21 January 2018

Identifiers

DOI

1 reference

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3 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

PubMed publication ID

27147815

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27147815%20AND%20SRC:MED&resulttype=core&format=json