Promoter escape by RNA polymerase II (Q29030884)

30 July 2017

1 reference

title

Promoter escape by RNA polymerase II (English)

1 reference

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

Promoter escape by RNA polymerase II. (English)

1 reference

30 July 2017

Arik Dvir

1

2 references

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

30 July 2017

language of work or name

English

0 references

publication date

September 2002

1 reference

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

1 September 2002

1 reference

Biochimica et Biophysica Acta. Gene Regulatory Mechanisms

30 July 2017

published in

1 reference

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

Biochimica et Biophysica Acta

26 March 2017

1 reference

30 July 2017

volume

1577

2 references

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

30 July 2017

issue

2

2 references

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

30 July 2017

page(s)

208-223

2 references

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

A three-step pathway of transcription initiation leading to promoter clearance at an activation RNA polymerase II promoter

30 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism of ATP-dependent promoter melting by transcription factor IIH

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism of promoter melting by the xeroderma pigmentosum complementation group B helicase of transcription factor IIH revealed by protein-DNA photo-cross-linking

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Footprinting analysis of mammalian RNA polymerase II along its transcript: an alternative view of transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism of promoter escape by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism and regulation of transcriptional elongation by RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Control of elongation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism of transcription initiation and promoter escape by RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Efficient and selective initiation by yeast RNA polymerase B in a dinucleotide-primed reaction

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

T7 Deoxyribonucleic acid directed, rapid-turnover, single-step addition reactions catalyzed by Escherichia coli ribonucleic acid polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

A Role for ATP and TFIIH in Activation of the RNA Polymerase II Preinitiation Complex Prior to Transcription Initiation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Assays for investigating transcription by RNA polymerase II in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Poly(dAT) dependent trinucleotide synthesis catalysed by wheat germ RNA polymerase II. Effects of nucleotide substrates and cordycepin triphosphate

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Effect of salts on abortive and productive elongation catalysed by wheat germ RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Eukaryotic gene transcription with purified components

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Abortive Initiation and First Bond Formation at an Activated Adenovirus E4 Promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Promoter escape by RNA polymerase II. A role for an ATP cofactor in suppression of arrest by polymerase at promoter-proximal sites

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Promoter escape by RNA polymerase II. Formation of an escape-competent transcriptional intermediate is a prerequisite for exit of polymerase from the promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Promoter escape limits the rate of RNA polymerase II transcription and is enhanced by TFIIE, TFIIH, and ATP on negatively supercoiled DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

A kinetic model for the early steps of RNA synthesis by human RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Kinetic and mechanistic analysis of the RNA polymerase II transcrption reaction at the human interleukin-2 promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Sarkosyl block of transcription reinitiation by RNA polymerase II as visualized by the colliding polymerases reinitiation assay

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Three transitions in the RNA polymerase II transcription complex during initiation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Yeast RNA polymerase II at 5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Architecture of RNA polymerase II and implications for the transcription mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Contacts between mammalian RNA polymerase II and the template DNA in a ternary elongation complex

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

A role for TFIIH in controlling the activity of early RNA polymerase II elongation complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

The general transcription factors of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

The role of general initiation factors in transcription by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mechanism of RNA polymerase II--specific initiation of transcription in vitro: ATP requirement and uncapped runoff transcripts

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Nucleotide requirements for activated RNA polymerase II open complex formation in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Human general transcription factor IIH phosphorylates the C-terminal domain of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

A carboxyl-terminal-domain kinase associated with RNA polymerase II transcription factor delta from rat liver

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

CTD kinase associated with yeast RNA polymerase II initiation factor b.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Phosphorylation of C-terminal domain of RNA polymerase II is not required in basal transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Polymerase II promoter activation: closed complex formation and ATP-driven start site opening

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH: a model for promoter clearance

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Dual roles for transcription factor IIF in promoter escape by RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

TFIIH action in transcription initiation and promoter escape requires distinct regions of downstream promoter DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Promoter-proximal stalling results from the inability to recruit transcription factor IIH to the transcription complex and is a regulated event

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

The ERCC2/DNA repair protein is associated with the class II BTF2/TFIIH transcription factor

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Nucleotide excision repair and human syndromes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Transcription elongation and human disease

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

A Role for the TFIIH XPB DNA Helicase in Promoter Escape by RNA Polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Distinct roles for the helicases of TFIIH in transcript initiation and promoter escape

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Mutations in XPB and XPD helicases found in xeroderma pigmentosum patients impair the transcription function of TFIIH.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Recycling of the general transcription factors during RNA polymerase II transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Physical Analysis of Transcription Preinitiation Complex Assembly on a Class II Gene Promoter

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Uncoupling of initiation and reinitiation rates during HeLa RNA polymerase II transcription in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Dissection of transcription factor TFIIF functional domains required for initiation and elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

The RAP74 subunit of human transcription factor IIF has similar roles in initiation and elongation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Dynamic interaction between a Drosophila transcription factor and RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Role of the mammalian transcription factors IIF, IIS, and IIX during elongation by RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Crystal structure of a yeast TBP/TATA-box complex

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Co-crystal structure of TBP recognizing the minor groove of a TATA element

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Crystal structure of a TFIIB-TBP-TATA-element ternary complex

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Trajectory of DNA in the RNA polymerase II transcription preinitiation complex

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

RAP74 induces promoter contacts by RNA polymerase II upstream and downstream of a DNA bend centered on the TATA box.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Wrapping of promoter DNA around the RNA polymerase II initiation complex induced by TFIIF.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Structural and functional interactions of transcription factor (TF) IIA with TFIIE and TFIIF in transcription initiation by RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Distinct cAMP response element-binding protein (CREB) domains stimulate different steps in a concerted mechanism of transcription activation

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

TFIIH is negatively regulated by cdk8-containing mediator complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Defective interplay of activators and repressors with TFIH in xeroderma pigmentosum

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Hepatitis B virus transactivator protein, HBx, associates with the components of TFIIH and stimulates the DNA helicase activity of TFIIH

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Initially transcribed sequences strongly affect the extent of abortive initiation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

Promoter clearance by RNA polymerase II is an extended, multistep process strongly affected by sequence

1 reference

https://api.crossref.org/works/10.1016%2FS0167-4781%2802%2900453-0

7 January 2021

10.1016/S0167-4781(02)00453-0

Identifiers

DOI

2 references

https://doi.org/10.1016%2FS0167-4781%2802%2900453-0

26 March 2017

30 July 2017

1 reference