An Andean origin of Phytophthora infestans inferred from mitochondrial and nuclear gene genealogies (Q29305626)

9 April 2017

main subject

Phytophthora infestans

object named as

Phytophthora infestans

1 reference

L. Gomez-Alpizar

1

1 reference

9 April 2017

I. Carbone

series ordinal

2

1 reference

9 April 2017

J. B. Ristaino

series ordinal

3

1 reference

9 April 2017

language of work or name

English

0 references

publication date

21 February 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

9 April 2017

published in

1 reference

9 April 2017

volume

104

1 reference

9 April 2017

issue

9

1 reference

9 April 2017

page(s)

3306-3311

1 reference

A single domestication for potato based on multilocus amplified fragment length polymorphism genotyping

9 April 2017

cites work

1 reference

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The biology of Phytophthora infestans at its center of origin

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Properties of statistical tests of neutrality for DNA polymorphism data

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Statistical tests of neutrality of mutations

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Estimation of levels of gene flow from DNA sequence data

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

On the number of segregating sites in genetical models without recombination

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Evolutionary relationship of DNA sequences in finite populations

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

The Population Structure of Phytophthora infestans from the Toluca Valley of Central Mexico Suggests Genetic Differentiation Between Populations from Cultivated Potato and Wild Solanum spp.

9 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

SNAP: Combine and Map modules for multilocus population genetic analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Mitochondrial genome sequences and molecular evolution of the Irish potato famine pathogen, Phytophthora infestans

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Linking phylogenetics with population genetics to reconstruct the geographic origin of a species.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Recombination and migration of Cryphonectria hypovirus 1 as inferred from gene genealogies and the coalescent.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Bounds on the minimum number of recombination events in a sample history.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Out of Africa again and again.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

PCR amplification of the Irish potato famine pathogen from historic specimens.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Polymorphisms in phytophthora infestans: four mitochondrial haplotypes are detected after PCR amplification of DNA from pure cultures or from host lesions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Characterization of a Phytophthora infestans gene involved in vesicle transport

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Panglobal distribution of a single clonal lineage of the Irish potato famine fungus

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Inference of haplotypes from PCR-amplified samples of diploid populations

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

A statistical test for detecting geographic subdivision

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Cloning and genetic analyses of two highly polymorphic, moderately repetitive nuclear DNAs from Phytophthora infestans

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Tracking historic migrations of the Irish potato famine pathogen, Phytophthora infestans

3 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Genetic Structure of Peruvian Populations of Phytophthora infestans

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Large discrepancies in differentiation of allozymes, nuclear and mitochondrial DNA loci in recently founded Pacific populations of the pearl oyster Pinctada margaritifera

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Variations in the Phytophthora infestans Population in Nepal as Revealed by Nuclear and Mitochondrial DNA Polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

SNAP: workbench management tool for evolutionary population genetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Identity of the mtDNA haplotype(s) of Phytophthora infestans in historical specimens from the Irish potato famine

21 January 2018

2 references

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Revealing the demographic histories of species using DNA sequences

26 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Restriction fragment length polymorphisms of mitochondrial DNA of Phytophthora infestans

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Diversity in and evidence for selection on the mitochondrial genome of Phytophthora infestans.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1805513

Emergence of Potato Blight, 1843–46

26 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0611479104

Molecular evolution of rDNA external transcribed spacer and phylogeny of sect. Petota (genus Solanum)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17360643

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetic Change Within Populations of Phytophthora infestans in the United States and Canada During 1994 to 1996: Role of Migration and Recombination

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17360643

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetic Diversity of Phytophthora infestans sensu lato in Ecuador Provides New Insight Into the Origin of This Important Plant Pathogen

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17360643

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0611479104

1 reference