Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox (Q29615372)

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30 April 2017

author name string

Becker SA

1

1 reference

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30 April 2017

Feist AM

2

1 reference

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30 April 2017

Mo ML

3

1 reference

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Hannum G

4

1 reference

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Palsson BØ

5

1 reference

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30 April 2017

Herrgard MJ

6

1 reference

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30 April 2017

language of work or name

1 reference

30 April 2017

publication date

2007

1 reference

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1 reference

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volume

2

1 reference

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issue

3

1 reference

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page(s)

727-38

1 reference

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Is there biological research beyond Systems Biology? A comparative analysis of terms

30 April 2017

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Reconstruction of cellular signalling networks and analysis of their properties

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Integrating high-throughput and computational data elucidates bacterial networks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Towards multidimensional genome annotation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Comparison of network-based pathway analysis methods

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

The JAK-STAT signaling network in the human B-cell: an extreme signaling pathway analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Genome-scale models of microbial cells: evaluating the consequences of constraints

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Metabolic gene-deletion strains of Escherichia coli evolve to computationally predicted growth phenotypes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Reconstruction of the central carbon metabolism of Aspergillus niger

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Modeling hybridoma cell metabolism using a generic genome-scale metabolic model of Mus musculus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Metabolic functions of duplicate genes in Saccharomyces cerevisiae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Global mapping of the yeast genetic interaction network

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

In silico design and adaptive evolution of Escherichia coli for production of lactic acid.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Genome-scale in silico aided metabolic analysis and flux comparisons of Escherichia coli to improve succinate production.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

FiatFlux--a software for metabolic flux analysis from 13C-glucose experiments

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Cytoscape: a software environment for integrated models of biomolecular interaction networks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Analysis of optimality in natural and perturbed metabolic networks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.99

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NPROT.2007.99

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17406635

30 April 2017

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

1020115

1016592716

0 references

1020115

1 reference

Consolidated OpenCitations Corpus – April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17406635

2 references

30 April 2017

Consolidated OpenCitations Corpus – April 2017