Transposable elements and the epigenetic regulation of the genome (Q29617224)

Europe PubMed Central

title

Transposable elements and the epigenetic regulation of the genome (English)

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30 April 2017

author name string

Slotkin RK

series ordinal

1

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30 April 2017

Martienssen R

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2

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language of work or name

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30 April 2017

publication date

April 2007

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30 April 2017

published in

Nature Reviews Genetics

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30 April 2017

volume

8

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issue

4

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30 April 2017

page(s)

272-85

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Initial sequencing and analysis of the human genome

30 April 2017

cites work

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Regulatory changes as a consequence of transposon insertion

31 March 2020

1 reference

A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans

31 March 2020

1 reference

The rde-1 gene, RNA interference, and transposon silencing in C. elegans

31 March 2020

1 reference

Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi

31 March 2020

1 reference

Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes

31 March 2020

1 reference

L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells

31 March 2020

1 reference

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

31 March 2020

1 reference

Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

31 March 2020

1 reference

The profile of repeat-associated histone lysine methylation states in the mouse epigenome

31 March 2020

1 reference

Transcription of IAP endogenous retroviruses is constrained by cytosine methylation

31 March 2020

1 reference

Asymmetric methylation in the hypermethylated CpG promoter region of the human L1 retrotransposon

31 March 2020

1 reference

Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L

31 March 2020

1 reference

Role of transposable elements in heterochromatin and epigenetic control

31 March 2020

1 reference

Epigenetic control of CACTA transposon mobility in Arabidopsis thaliana

31 March 2020

1 reference

Association of Lsh, a regulator of DNA methylation, with pericentromeric heterochromatin is dependent on intact heterochromatin

31 March 2020

1 reference

Lsh, an epigenetic guardian of repetitive elements

31 March 2020

1 reference

RNA interference and heterochromatin in the fission yeast Schizosaccharomyces pombe

31 March 2020

1 reference

Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

31 March 2020

1 reference

Argonaute slicing is required for heterochromatic silencing and spreading

31 March 2020

1 reference

Global effects on gene expression in fission yeast by silencing and RNA interference machineries.

31 March 2020

1 reference

Small RNAs in genome rearrangement in Tetrahymena.

31 March 2020

1 reference

Genetic and functional diversification of small RNA pathways in plants

31 March 2020

1 reference

Two classes of short interfering RNA in RNA silencing

31 March 2020

1 reference

Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.

31 March 2020

1 reference

RNA polymerase IV directs silencing of endogenous DNA.

31 March 2020

1 reference

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.

31 March 2020

1 reference

Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis.

31 March 2020

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Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

31 March 2020

1 reference

Atypical RNA polymerase subunits required for RNA-directed DNA methylation.

31 March 2020

1 reference

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

31 March 2020

1 reference

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

31 March 2020

1 reference

A SNF2-like protein facilitates dynamic control of DNA methylation

31 March 2020

1 reference

RNAi-mediated pathways in the nucleus

31 March 2020

1 reference

Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing

31 March 2020

1 reference

The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells

31 March 2020

1 reference

Drosophila melanogaster P transposable elements: mechanisms of transposition and regulation

31 March 2020

1 reference

aubergine mutations in Drosophila melanogaster impair P cytotype determination by telomeric P elements inserted in heterochromatin.

31 March 2020

1 reference

RNA silencing in Drosophila

31 March 2020

1 reference

Taming of transposable elements by homology-dependent gene silencing.

31 March 2020

1 reference

A distinct small RNA pathway silences selfish genetic elements in the germline

31 March 2020

1 reference

Evidence for a piwi-dependent RNA silencing of the gypsy endogenous retrovirus by the Drosophila melanogaster flamenco gene

31 March 2020

1 reference

Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster

31 March 2020

1 reference

A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal

31 March 2020

1 reference

Drosophila rasiRNA pathway mutations disrupt embryonic axis specification through activation of an ATR/Chk2 DNA damage response

31 March 2020

1 reference

A novel class of small RNAs bind to MILI protein in mouse testes

31 March 2020

1 reference

A novel class of small RNAs in mouse spermatogenic cells

31 March 2020

1 reference

A germline-specific class of small RNAs binds mammalian Piwi proteins

31 March 2020

1 reference

The small RNA profile during Drosophila melanogaster development

31 March 2020

1 reference

Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

31 March 2020

1 reference

Structural and functional dynamics of human centromeric chromatin

31 March 2020

1 reference

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

31 March 2020

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Centromeres put epigenetics in the driver's seat

31 March 2020

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Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability

31 March 2020

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Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells.

31 March 2020

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The role of heterochromatin in centromere function

31 March 2020

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The role of RNA interference in heterochromatic silencing

31 March 2020

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Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats

31 March 2020

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A molecular view of plant centromeres

31 March 2020

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Dicer is essential for formation of the heterochromatin structure in vertebrate cells

31 March 2020

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Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

31 March 2020

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CENP-B box is required for de novo centromere chromatin assembly on human alphoid DNA.

31 March 2020

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Evolutionary dynamics of transposable elements at the centromere

31 March 2020

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Maintenance of heterochromatin by RNA interference of tandem repeats

31 March 2020

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Telomerase catalytic subunit homologs from fission yeast and human

31 March 2020

1 reference

Two retrotransposons maintain telomeres in Drosophila

31 March 2020

1 reference

RNA interference has a role in regulating Drosophila telomeres

31 March 2020

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Telomere elongation is under the control of the RNAi-based mechanism in the Drosophila germline

31 March 2020

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DNA methyltransferases control telomere length and telomere recombination in mammalian cells

31 March 2020

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Position-effect variegation and the genetic dissection of chromatin regulation in Drosophila

31 March 2020

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cis-Acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four

31 March 2020

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Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter

31 March 2020

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SU(VAR)3-9 is a conserved key function in heterochromatic gene silencing.

31 March 2020

1 reference

Insulators: exploiting transcriptional and epigenetic mechanisms

31 March 2020

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RNA interference machinery influences the nuclear organization of a chromatin insulator.

31 March 2020

1 reference

Do LINEs have a role in X-chromosome inactivation?

31 March 2020

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The DNA sequence of the human X chromosome

31 March 2020

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The DXPas34 repeat regulates random and imprinted X inactivation.

31 March 2020

1 reference

Metastable epialleles in mammals

31 March 2020

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Origin of a substantial fraction of human regulatory sequences from transposable elements

31 March 2020

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Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution

31 March 2020

1 reference

Genome evolution mediated by Ty elements in Saccharomyces

31 March 2020

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Many human genes are transcribed from the antisense promoter of L1 retrotransposon.

31 March 2020

1 reference

Epigenetic inheritance at the agouti locus in the mouse

31 March 2020

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Dynamic reprogramming of DNA methylation at an epigenetically sensitive allele in mice

31 March 2020

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Dnmt1 expression in pre- and postimplantation embryogenesis and the maintenance of IAP silencing

31 March 2020

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L1 antisense promoter drives tissue-specific transcription of human genes

31 March 2020

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Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.

31 March 2020

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Retrotransposons as epigenetic mediators of phenotypic variation in mammals

31 March 2020

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Differential chromatin structure within a tandem array 100 kb upstream of the maize b1 locus is associated with paramutation

31 March 2020

1 reference

An RNA-dependent RNA polymerase is required for paramutation in maize

31 March 2020

1 reference

Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors

31 March 2020

1 reference

Transcriptionally silenced transgenes in maize are activated by three mutations defective in paramutation

31 March 2020

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RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse

31 March 2020

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Alu repeated DNAs are differentially methylated in primate germ cells

31 March 2020

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High concentrations of long interspersed nuclear element sequence distinguish monoallelically expressed genes

31 March 2020

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Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome

31 March 2020

1 reference

Co-evolution of X-chromosome inactivation and imprinting in mammals

31 March 2020

1 reference

Dnmt3L and the establishment of maternal genomic imprints.

31 March 2020

1 reference

A small family of sushi-class retrotransposon-derived genes in mammals and their relation to genomic imprinting.

31 March 2020

1 reference

A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21

31 March 2020

1 reference

RNAi-Mediated Allelic trans-Interaction at the Imprinted Rtl1/Peg11 Locus

31 March 2020

1 reference

Two-step recruitment of RNA-directed DNA methylation to tandem repeats

31 March 2020

1 reference

One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation

31 March 2020

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Repetitive elements in imprinted genes.

31 March 2020

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Genetic and epigenetic regulation of IgH gene assembly

31 March 2020

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Antisense intergenic transcription in V(D)J recombination.

31 March 2020

1 reference

Transposable elements and host genome evolution

31 March 2020

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Selfish genes, the phenotype paradigm and genome evolution

31 March 2020

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Remarkable variation in maize genome structure inferred from haplotype diversity at the bz locus

31 March 2020

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Fitness cost of LINE-1 (L1) activity in humans

31 March 2020

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Extensive individual variation in L1 retrotransposition capability contributes to human genetic diversity

31 March 2020

1 reference

Mobile elements and mammalian genome evolution.

31 March 2020

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Interindividual variability and parent of origin DNA methylation differences at specific human Alu elements.

31 March 2020

1 reference

Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon

31 March 2020

1 reference

Mobile elements: drivers of genome evolution

31 March 2020

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Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication

31 March 2020

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Telomeric transgenes and trans-silencing in Drosophila.

31 March 2020

1 reference

A two-hit trigger for siRNA biogenesis in plants

31 March 2020

1 reference

Epigenetic regulation of the maize Spm transposable element: novel activation of a methylated promoter by TnpA

31 March 2020

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The significance of responses of the genome to challenge

31 March 2020

1 reference

Stress and transposable elements: co-evolution or useful parasites?

31 March 2020

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Position effect variegation at fission yeast centromeres.

31 March 2020

1 reference

A temperature cline in copy number for 412 but not roo/B104 retrotransposons in populations of Drosophila simulans.

31 March 2020

1 reference

RNAi-independent heterochromatin nucleation by the stress-activated ATF/CREB family proteins

31 March 2020

1 reference

Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring

31 March 2020

1 reference

Transposable elements: targets for early nutritional effects on epigenetic gene regulation

31 March 2020

1 reference

Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells

31 March 2020

1 reference

The Frog Prince: a reconstructed transposon from Rana pipiens with high transpositional activity in vertebrate cells

31 March 2020

1 reference

Active retrotransposition by a synthetic L1 element in mice

31 March 2020

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What transposable elements tell us about genome organization and evolution: the case of Drosophila

31 March 2020

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Transposable elements and the evolution of genome size in eukaryotes

31 March 2020

1 reference

Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium

31 March 2020

1 reference

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

31 March 2020

1 reference

Genetics and epigenetics in flower pigmentation associated with transposable elements in morning glories

31 March 2020

1 reference

DNA methylation and epigenetic inheritance in plants and filamentous fungi

31 March 2020

1 reference

RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons

31 March 2020

1 reference

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31 March 2020

Identifiers

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30 April 2017

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

140087

1016430364

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Consolidated OpenCitations Corpus – April 2017