DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences (Q29959356)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

title

DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

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3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

author name string

Erik S Wright

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

L Safak Yilmaz

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

language of work or name

English

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publication date

18 November 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

Applied and Environmental Microbiology

17 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

volume

78

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

issue

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

page(s)

717-725

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

https://www.ncbi.nlm.nih.gov/pubmed/22101057

UCHIME improves sensitivity and speed of chimera detection

16 May 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

17 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Accurate determination of microbial diversity from 454 pyrosequencing data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3264099

3 June 2018

1 reference

18 October 2022

https://opencitations.net/index/coci/api/v1/citations/10.1128/MR.51.2.221-271.1987

Identifiers

DOI

10.1128/AEM.06516-11

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22101057%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

PubMed publication ID

22101057

2 references