Structural changes induced by binding of the high-mobility group I protein to a mouse satellite DNA sequence (Q30326729)

18 September 2017

Structural changes induced by binding of the high-mobility group I protein to a mouse satellite DNA sequence (English)

1 reference

18 September 2017

Slama-Schwok A

1

1 reference

18 September 2017

Zakrzewska K

2

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18 September 2017

Léger G

3

1 reference

18 September 2017

Leroux Y

4

1 reference

18 September 2017

Takahashi M

5

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18 September 2017

Käs E

6

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18 September 2017

Debey P

7

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18 September 2017

language of work or name

English

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publication date

1 May 2000

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18 September 2017

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18 September 2017

78

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18 September 2017

5

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18 September 2017

2543-2559

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The role of HMG I(Y) in the assembly and function of the IFN-beta enhanceosome

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Specific binding of high-mobility-group I (HMGI) protein and histone H1 to the upstream AT-rich region of the murine beta interferon promoter: HMGI protein acts as a potential antirepressor of the promoter

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Binding of HMG-I(Y) elicits structural changes in a silencer of the human beta-globin gene

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Three distinct sub-nuclear populations of HMG-I protein of different properties revealed by co-localization image analysis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

AT-hook motifs identified in a wide variety of DNA-binding proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Protein footprinting reveals specific binding modes of a high mobility group protein I to DNAs of different conformation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Minor groove-binding architectural proteins: structure, function, and DNA recognition.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

In vivo analysis of scaffold-associated regions in Drosophila: a synthetic high-affinity SAR binding protein suppresses position effect variegation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Modulation of activity of Moloney murine leukemia virus preintegration complexes by host factors in vitro.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

NF-kappaB mediated transcriptional activation is enhanced by the architectural factor HMGI-C.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Effects of epidermal growth factor and estrogen on the regulation of the HMG-I/Y gene in human mammary epithelial cell lines

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Competition between HMG-I(Y), HMG-1 and histone H1 on four-way junction DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

The solution structure of an HMG-I(Y)-DNA complex defines a new architectural minor groove binding motif

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Conformational changes of DNA induced by binding of Chironomus high mobility group protein 1a (cHMG1a). Regions flanking an HMG1 box domain do not influence the bend angle of the DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Intra- and intermolecular cooperative binding of high-mobility-group protein I(Y) to the beta-interferon promoter

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

HIV-1 cDNA integration: requirement of HMG I(Y) protein for function of preintegration complexes in vitro

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Condensation of DNA and chromatin by an SPKK-containing octapeptide repeat motif present in the C-terminus of histone H1.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

HMG I(Y) interferes with the DNA binding of NF-AT factors and the induction of the interleukin 4 promoter in T cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

High level expression of the HMGI (Y) gene during embryonic development.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

An IL-2 response element in the human IL-2 receptor alpha chain promoter is a composite element that binds Stat5, Elf-1, HMG-I(Y) and a GATA family protein

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Involvement of a high-mobility-group protein in the transcriptional activity of herpes simplex virus latency-active promoter 2.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Human papillomavirus type 16 E6 protein up-regulates the expression of the high mobility group protein HMG-I(Y) gene in mouse 10T1/2 cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

High-mobility-group chromosomal proteins: architectural components that facilitate chromatin function.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Multivalent DNA-binding properties of the HMG-1 proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Virus induction of human IFN beta gene expression requires the assembly of an enhanceosome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Mechanisms of transcriptional synergism between distinct virus-inducible enhancer elements

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

SAR-dependent mobilization of histone H1 by HMG-I/Y in vitro: HMG-I/Y is enriched in H1-depleted chromatin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Coupling of local folding to site-specific binding of proteins to DNA

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

HMG domain proteins: architectural elements in the assembly of nucleoprotein structures

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Regulation of cell-type-specific interleukin-2 receptor alpha-chain gene expression: potential role of physical interactions between Elf-1, HMG-I(Y), and NF-kappa B family proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Functional interaction between the POU domain protein Tst-1/Oct-6 and the high-mobility-group protein HMG-I/Y

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Polyamines alter sequence-specific DNA-protein interactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Structural variety of arginine-rich RNA-binding peptides

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

A protein binds to a satellite DNA repeat at three specific sites that would be brought into mutual proximity by DNA folding in the nucleosome.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Reconstitution experiments show that sequence-specific histone-DNA interactions are the basis for nucleosome phasing on mouse satellite DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

A mammalian high mobility group protein recognizes any stretch of six A.T base pairs in duplex DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Specific recognition of cruciform DNA by nuclear protein HMG1.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Defining the structure of irregular nucleic acids: conventions and principles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Curvature of mouse satellite DNA and condensation of heterochromatin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Repeat peptide motifs which contain beta-turns and modulate DNA condensation in chromatin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Beta-turns and their distortions: a proposed new nomenclature

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Satellite DNAs contain sequences that induced curvature.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Fluorescence energy transfer between dimethyldiazaperopyrenium dication and ethidium intercalated in poly d(A-T).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Binding characteristics of Hoechst 33258 with calf thymus DNA, poly[d(A-T)] and d(CCGGAATTCCGG): multiple stoichiometries and determination of tight binding with a wide spectrum of site affinities

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Identification of sequence elements contributing to the intrinsic curvature of the mouse satellite DNA repeat

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Alternating d(G-A) sequences form a parallel-stranded DNA homoduplex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Hoechst 33258, distamycin A, and high mobility group protein I (HMG-I) compete for binding to mouse satellite DNA.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

SARs are cis DNA elements of chromosome dynamics: synthesis of a SAR repressor protein.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300844

A tandem repeat of the SPKK peptide motif induces psi-type DNA structures at alternating AT sequences

26 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Induction of early transcription in one-cell mouse embryos by microinjection of the nonhistone chromosomal protein HMG-I.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Nucleic acid hybridization accompanied with excimer formation from two pyrene-labeled probes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

1H and 13C NMR assignments and molecular modelling of a minor groove DNA-binding peptide from the HMG-I protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Reversal of intrinsic DNA bends in the IFN beta gene enhancer by transcription factors and the architectural protein HMG I(Y)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

DNA condensation with polyamines I. Spectroscopic studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Determination of DNA helical handedness by fluorescence resonance energy transfer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Trifluoroethanol promotes helix formation by destabilizing backbone exposure: desolvation rather than native hydrogen bonding defines the kinetic pathway of dimeric coiled coil folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Pyrene derivatives as fluorescent probes of conformation near the 3' termini of polyribonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Contribution of light scattering to the circular dichroism of deoxyribonucleic acid films, deoxyribonucleic acid-polylysine complexes, and deoxyribonucleic acid particles in ethanolic buffers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Triple helix formation and homologous strand exchange in pyrene-labeled oligonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Changes in superhelicity are introduced into closed circular DNA by binding of high mobility group protein I/Y

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Substrate structure influences binding of the non-histone protein HMG-I(Y) to free nucleosomal DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

DNA curvature in solution measured by fluorescence resonance energy transfer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Calculation of protein conformation from circular dichroism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976799-3

Expression of HMGI(Y) proteins in squamous intraepithelial and invasive lesions of the uterine cervix

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10777751

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA bending by the chromosomal protein HMG1 and its high mobility group box domains. Effect of flanking sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10777751

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A conformational study of the sequence specific binding of HMG-I (Y) with the bovine interleukin-2 cDNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10777751

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(00)76799-3

1 reference

18 September 2017

1 reference

18 September 2017

PubMed publication ID

10777751

1 reference