Analysis of homodimeric protein interfaces by graph-spectral methods. (Q30330248)

18 June 2017

Analysis of homodimeric protein interfaces by graph-spectral methods. (English)

1 reference

18 June 2017

Brinda KV

1

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18 June 2017

Kannan N

series ordinal

2

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18 June 2017

Vishveshwara S

series ordinal

3

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18 June 2017

1 April 2002

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Protein Engineering Design and Selection

18 June 2017

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18 June 2017

15

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18 June 2017

265-277

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18 June 2017

4

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A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures

18 June 2017

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

A model of synthetase/transfer RNA interaction as deduced by protein engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Anatomy of hot spots in protein interfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Rat mannose-binding protein a binds CD14.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Principles of protein-protein recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

The molecular surface package

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Human triose-phosphate isomerase deficiency: a single amino acid substitution results in a thermolabile enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Progesterone binding to uteroglobin: two alternative orientations of the ligand.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Phospholipase A2 engineering. Structural and functional roles of highly conserved active site residues tyrosine-52 and tyrosine-73

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Receptor recognition and specificity of interleukin-8 is determined by residues that cluster near a surface-accessible hydrophobic pocket

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Side-chain clusters in protein structures and their role in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

VMD: visual molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Determinants of cofactor specificity in isocitrate dehydrogenase: structure of an engineered NADP+ --> NAD+ specificity-reversal mutant

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Principles of protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Analysis of protein-protein interaction sites using surface patches

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Identification of side-chain clusters in protein structures by a graph spectral method.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Aromatic clusters: a determinant of thermal stability of thermophilic proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Stabilizing interactions in the dimer interface of alpha-subunit in Escherichia coli RNA polymerase: a graph spectral and point mutation study

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Clusters in alpha/beta barrel proteins: implications for protein structure, function, and folding: a graph theoretical approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Analysis of protein sheet topologies by graph theoretical methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Roles of surface hydrophobic residues in the interfacial catalysis of bovine pancreatic phospholipase A2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Computational methods for biomolecular docking.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Phospholipase A2 engineering. Probing the structural and functional roles of N-terminal residues with site-directed mutagenesis, X-ray, and NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Effect of D57N mutation on membrane activity and molecular unfolding of cobra cardiotoxin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Stabilization of human triosephosphate isomerase by improvement of the stability of individual alpha-helices in dimeric as well as monomeric forms of the protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Use of techniques derived from graph theory to compare secondary structure motifs in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Backbone cluster identification in proteins by a graph theoretical method.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Predictive docking of protein-protein and protein-DNA complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Interaction of mannose-binding protein with associated serine proteases: effects of naturally occurring mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Structural and mutagenesis studies of leishmania triosephosphate isomerase: a point mutation can convert a mesophilic enzyme into a superstable enzyme without losing catalytic power

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

Hydrogen bonds and salt bridges across protein-protein interfaces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

The accessible surface area and stability of oligomeric proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FPROTEIN%2F15.4.265

21 January 2018

Identifiers

DOI

10.1093/PROTEIN/15.4.265

1 reference

release_2l6sg72t2nehrcfuacdhgvs3gq

18 June 2017

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Fatcat

https://api.fatcat.wiki/v0/release/2l6sg72t2nehrcfuacdhgvs3gq

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24 November 2022

based on heuristic

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