Making ATP. (Q30351588)

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English	Making ATP.	scientific article

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7 January 2020

Making ATP (English)

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7 January 2020

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7 January 2020

author name string

Jung-Chi Liao

2

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7 January 2020

George Oster

3

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7 January 2020

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10 October 2005

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7 January 2020

Proceedings of the National Academy of Sciences of the United States of America

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7 January 2020

102

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7 January 2020

46

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7 January 2020

16539-16546

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Europe PubMed Central

PMC publication ID

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7 January 2020

From continuum Fokker-Planck models to discrete kinetic models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Activation of pausing F1 motor by external force

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Torque generation by the Fo motor of the sodium ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

ATP hydrolysis in the betaTP and betaDP catalytic sites of F1-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The structure of bovine F1-ATPase inhibited by ADP and beryllium fluoride

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Rotation of F1-ATPase: how an ATP-driven molecular machine may work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ ATPases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

New advances in normal mode analysis of supermolecular complexes and applications to structural refinement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Asymmetry in the F1-ATPase and its implications for the rotational cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A comparative study of motor-protein motions by using a simple elastic-network model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

On the Mechanism of ATP Hydrolysis in F1-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A model for the cooperative free energy transduction and kinetics of ATP hydrolysis by F 1 -ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Conformational dynamics of the F1-ATPase beta-subunit: a molecular dynamics study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The unbinding of ATP from F1-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

ATP synthesis driven by proton transport in F1F0-ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Rotary protein motors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A coarse-grained normal mode approach for macromolecules: an efficient implementation and application to Ca(2+)-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A research journey with ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The molecular mechanism of ATP synthesis by F1F0-ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

ATP synthases in the year 2000: evolving views about the structures of these remarkable enzyme complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Pause and rotation of F(1)-ATPase during catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Structure of bovine mitochondrial F(1)-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The physics of molecular motors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The rotary mechanism of ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The structure of the central stalk in bovine F(1)-ATPase at 2.4 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Stepping rotation of F1-ATPase visualized through angle-resolved single-fluorophore imaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Reverse engineering a protein: the mechanochemistry of ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

ATP synthase: what we know about ATP hydrolysis and what we do not know about ATP synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Molecular mechanisms of rotational catalysis in the F(0)F(1) ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

On what makes the gamma subunit spin during ATP hydrolysis by F(1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A rotary molecular motor that can work at near 100% efficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The mechanochemistry of V-ATPase proton pumps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Energy transduction in the F1 motor of ATP synthase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

ATP synthase--past and future

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The ATP synthase--a splendid molecular machine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

The binding change mechanism for ATP synthase--some probabilities and possibilities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Kinetic mechanism of mitochondrial adenosine triphosphatase. Inhibition by azide and activation by sulphite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A perspective of the binding change mechanism for ATP synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

F0F1-ATPase gamma subunit mutations perturb the coupling between catalysis and transport

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Determination of the 1-ethyl-3-[(3-dimethylamino)propyl]-carbodiimide- induced cross-link between the beta and epsilon subunits of Escherichia coli F1-ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Subunit interaction during catalysis: alternating site cooperativity in photophosphorylation shown by substrate modulation of [18O]ATP species formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

Active/inactive state transitions of mitochondrial ATPase molecules influenced by Mg2+ , anions and aurovertin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

3 June 2018

A normal mode analysis of structural plasticity in the biomolecular motor F(1)-ATPase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Kinetic modeling of ATP synthesis by ATP synthase and its mechanistic implications.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

F1-ATPase changes its conformations upon phosphate release

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Elastic energy storage in beta-sheets with application to F1-ATPase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Mechanochemistry of t7 DNA helicase.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

The Escherichia coli F1F0 ATP Synthase Displays Biphasic Synthesis Kinetics

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Disulfide bond formation between the COOH-terminal domain of the beta subunits and the gamma and epsilon subunits of the Escherichia coli F1-ATPase. Structural implications and functional consequences.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Catalytic activity of the alpha3beta3gamma complex of F1-ATPase without noncatalytic nucleotide binding site

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

ATP synthesis by F0F1-ATP synthase independent of noncatalytic nucleotide binding sites and insensitive to azide inhibition

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Contraction transitions of F1-F0 ATPase during catalytic turnover.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Multiconfiguration molecular mechanics algorithm for potential energy surfaces of chemical reactions

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0507207102

21 January 2018

Does F1-ATPase subunit gamma turn in the wrong direction?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

26 November 2018

Building-block approach for determining low-frequency normal modes of macromolecules.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

26 November 2018

The gamma subunit of the Escherichia coli ATP synthase. Mutations in the carboxyl-terminal region restore energy coupling to the amino-terminal mutant gamma Met-23-->Lys.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283826

26 November 2018

A dynamic analysis of the rotation mechanism for conformational change in F(1)-ATPase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probes of catalytic site cooperativity during catalysis by the chloroplast adenosine triphosphate and the adenosine triphosphate synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assessment of the rate of bound substrate interconversion and of ATP acceleration of product release during catalysis by mitochondrial adenosine triphosphatase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibition of the adenosinetriphosphatase activity of Escherichia coli F1 by the water-soluble carbodiimide 1-ethyl-3-[3-(dimethylamino)propyl]carbodiimide is due to modification of several carboxyls in the beta subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic properties of the F1-adenosine triphosphatase from Escherichia coli K-12 and its genetic variants as revealed by 18O exchanges

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic and regulatory effects of light intensity on chloroplast ATP synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16217018

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0507207102

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16217018%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

2005PNAS..10216539X

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16217018%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16217018%20AND%20SRC:MED&resulttype=core&format=json

7 January 2020

ResearchGate publication ID

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