Extensive subunit contacts underpin herpesvirus capsid stability and interior-to-exterior allostery. (Q30355730)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27111889%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

title

Extensive subunit contacts underpin herpesvirus capsid stability and interior-to-exterior allostery (English)

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2 April 2020

6

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2 April 2020

author name string

Alexis Huet

1

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2 April 2020

Alexander M Makhov

2

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2 April 2020

Jamie B Huffman

3

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2 April 2020

Matthijn Vos

4

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2 April 2020

Fred L Homa

5

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2 April 2020

publication date

25 April 2016

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Nature Structural & Molecular Biology

2 April 2020

published in

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2 April 2020

volume

23

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2 April 2020

page(s)

531-539

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2 April 2020

issue

6

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Subassemblies and asymmetry in assembly of herpes simplex virus procapsid

2 April 2020

cites work

1 reference

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2.2 Å resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor

3 June 2018

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2.8 Å resolution reconstruction of the Thermoplasma acidophilum 20S proteasome using cryo-electron microscopy

3 June 2018

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Insights into herpesvirus tegument organization from structural analyses of the 970 central residues of HSV-1 UL36 protein

3 June 2018

1 reference

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CryoEM and mutagenesis reveal that the smallest capsid protein cements and stabilizes Kaposi's sarcoma-associated herpesvirus capsid

3 June 2018

1 reference

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The large tegument protein pUL36 is essential for formation of the capsid vertex-specific component at the capsid-tegument interface of herpes simplex virus 1.

3 June 2018

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Four levels of hierarchical organization, including noncovalent chainmail, brace the mature tumor herpesvirus capsid against pressurization.

3 June 2018

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Organization of capsid-associated tegument components in Kaposi's sarcoma-associated herpesvirus

3 June 2018

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DNA binding and condensation properties of the herpes simplex virus type 1 triplex protein VP19C

3 June 2018

1 reference

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Transient contacts on the exterior of the HK97 procapsid that are essential for capsid assembly.

3 June 2018

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Protein interactions in the murine cytomegalovirus capsid revealed by cryoEM.

3 June 2018

1 reference

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The smallest capsid protein mediates binding of the essential tegument protein pp150 to stabilize DNA-containing capsids in human cytomegalovirus

3 June 2018

1 reference

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Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling

3 June 2018

1 reference

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Structure of the pseudorabies virus capsid: comparison with herpes simplex virus type 1 and differential binding of essential minor proteins

3 June 2018

1 reference

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Prevention of overfitting in cryo-EM structure determination

3 June 2018

1 reference

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Nuclear egress of pseudorabies virus capsids is enhanced by a subspecies of the large tegument protein that is lost upon cytoplasmic maturation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

The UL36 tegument protein of herpes simplex virus 1 has a composite binding site at the capsid vertices

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Outcome of the first electron microscopy validation task force meeting

3 June 2018

1 reference

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The herpes simplex virus 1 UL17 protein is the second constituent of the capsid vertex-specific component required for DNA packaging and retention

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Residues of the UL25 protein of herpes simplex virus that are required for its stable interaction with capsids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

The Prohead-I Structure of Bacteriophage HK97: Implications for Scaffold-Mediated Control of Particle Assembly and Maturation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Structure and capsid association of the herpesvirus large tegument protein UL36.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Mutational analysis of the herpes simplex virus type 1 UL25 DNA packaging protein reveals regions that are important after the viral DNA has been packaged

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Labeling and localization of the herpes simplex virus capsid protein UL25 and its interaction with the two triplexes closest to the penton

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Structural basis of enzyme encapsulation into a bacterial nanocompartment

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Role of the UL25 protein in herpes simplex virus DNA encapsidation

3 June 2018

1 reference

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An improved cryogen for plunge freezing

3 June 2018

1 reference

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Partial functional complementation of a pseudorabies virus UL25 deletion mutant by herpes simplex virus type 1 pUL25 indicates overlapping functions of alphaherpesvirus pUL25 proteins

3 June 2018

1 reference

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The capsid and tegument of the alphaherpesviruses are linked by an interaction between the UL25 and VP1/2 proteins.

3 June 2018

1 reference

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Structural features of the scaffold interaction domain at the N terminus of the major capsid protein (VP5) of herpes simplex virus type 1.

3 June 2018

1 reference

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Allosteric signaling and a nuclear exit strategy: binding of UL25/UL17 heterodimers to DNA-Filled HSV-1 capsids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM.

3 June 2018

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AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles

3 June 2018

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Bsoft: image processing and molecular modeling for electron microscopy

3 June 2018

1 reference

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Herpes simplex virus 1 DNA packaging proteins encoded by UL6, UL15, UL17, UL28, and UL33 are located on the external surface of the viral capsid

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Structural characterization of the UL25 DNA-packaging protein from herpes simplex virus type 1

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Herpes simplex virus type 1 DNA-packaging protein UL17 is required for efficient binding of UL25 to capsids

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Common ancestry of herpesviruses and tailed DNA bacteriophages

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Crosslinking renders bacteriophage HK97 capsid maturation irreversible and effects an essential stabilization.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

UCSF Chimera--a visualization system for exploratory research and analysis

3 June 2018

1 reference

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Accurate determination of local defocus and specimen tilt in electron microscopy

3 June 2018

1 reference

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ICP34.5 deleted herpes simplex virus with enhanced oncolytic, immune stimulating, and anti-tumour properties

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Structure of the herpesvirus major capsid protein

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

The crystal structure of the Epstein-Barr virus protease shows rearrangement of the processed C terminus

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

The UL6 gene product forms the portal for entry of DNA into the herpes simplex virus capsid.

3 June 2018

1 reference

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Topologically linked protein rings in the bacteriophage HK97 capsid

3 June 2018

1 reference

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Protein secondary structure prediction based on position-specific scoring matrices

3 June 2018

1 reference

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Assembly of the herpes simplex virus capsid: preformed triplexes bind to the nascent capsid.

3 June 2018

1 reference

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Active site cavity of herpesvirus proteases revealed by the crystal structure of herpes simplex virus protease/inhibitor complex

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Structure of the herpes simplex virus capsid: peptide A862-H880 of the major capsid protein is displayed on the rim of the capsomer protrusions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Crystal structure of varicella-zoster virus protease

3 June 2018

1 reference

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Unique fold and active site in cytomegalovirus protease

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

A new serine-protease fold revealed by the crystal structure of human cytomegalovirus protease

3 June 2018

1 reference

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Structural transitions during maturation of bacteriophage lambda capsids

3 June 2018

1 reference

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Structure of the herpes simplex virus capsid. Molecular composition of the pentons and the triplexes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Finding a needle in a haystack: detection of a small protein (the 12-kDa VP26) in a large complex (the 200-MDa capsid of herpes simplex virus).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

The two dispensable structural proteins (soc and hoc) of the T4 phage capsid; their purification and properties, isolation and characterization of the defective mutants, and their binding with the defective heads in vitro

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4899274

Local and distant immunity induced by intralesional vaccination with an oncolytic herpes virus encoding GM-CSF in patients with stage IIIc and IV melanoma

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.3212

Seeing the herpesvirus capsid at 8.5 A

31 March 2020

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNSMB.3212

31 March 2020

Identifiers

DOI

10.1038/NSMB.3212

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27111889%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27111889%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

1 reference