nDNA-Prot: identification of DNA-binding proteins based on unbalanced classification. (Q30366530)

9 November 2017

nDNA-Prot: identification of DNA-binding proteins based on unbalanced classification. (English)

1 reference

9 November 2017

6

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9 November 2017

Li Song

1

1 reference

9 November 2017

Dapeng Li

2

1 reference

9 November 2017

Xiangxiang Zeng

3

1 reference

9 November 2017

Yunfeng Wu

4

1 reference

9 November 2017

Li Guo

5

1 reference

9 November 2017

8 September 2014

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9 November 2017

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9 November 2017

15

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9 November 2017

298

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enDNA-Prot: identification of DNA-binding proteins by applying ensemble learning.

9 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Using distances between Top-n-gram and residue pairs for protein remote homology detection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

An approach for identifying cytokines based on a novel ensemble classifier.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Hierarchical classification of protein folds using a novel ensemble classifier

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Using amino acid physicochemical distance transformation for fast protein remote homology detection

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

A global characterization and identification of multifunctional enzymes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

iDNA-Prot: identification of DNA binding proteins using random forest with grey model

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

ZiF-Predict: a web tool for predicting DNA-binding specificity in C2H2 zinc finger proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Boosting the prediction and understanding of DNA-binding domains from sequence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

iDBPs: a web server for the identification of DNA binding proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Identification of novel DNA repair proteins via primary sequence, secondary structure, and homology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Gene selection algorithm by combining reliefF and mRMR

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Identification of DNA-binding proteins using support vector machines and evolutionary profiles

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Predicting DNA-binding proteins: approached from Chou's pseudo amino acid composition and other specific sequence features

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Residue-level prediction of DNA-binding sites and its application on DNA-binding protein predictions.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

A novel computational method to predict transcription factor DNA binding preference.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Moment-based prediction of DNA-binding proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Rapid identification of DNA-binding proteins by mass spectrometry

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Improved method for predicting protein fold patterns with ensemble classifiers.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Recurrent neural network for non-smooth convex optimization problems with application to the identification of genetic regulatory networks.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

A novel computational approach to predict transcription factor DNA binding preference.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

An ensemble of reduced alphabets with protein encoding based on grouped weight for predicting DNA-binding proteins

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Pattern recognition strategies for molecular surfaces: III. Binding site prediction with a neural network

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Support vector machines for predicting rRNA-, RNA-, and DNA-binding proteins from amino acid sequence.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Artificial neural networks for computer-based molecular design.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165999

Sequence clustering strategies improve remote homology recognitions while reducing search times

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25196432

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-15-298

1 reference

journals/bmcbi/SongLZWGZ14

9 November 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

9 November 2017

PubMed publication ID

25196432

1 reference