Conformational changes of alpha-chymotrypsin in a fibrillation-promoting condition: a molecular dynamics study. (Q30370957)

14 October 2017

Conformational changes of alpha-chymotrypsin in a fibrillation-promoting condition: a molecular dynamics study. (English)

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molecular dynamics simulation

14 October 2017

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author

Nasrollah Rezaei-Ghaleh

series ordinal

1

object named as

Nasrollah Rezaei-Ghaleh

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14 October 2017

Mehriar Amininasab

2

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14 October 2017

Mohsen Nemat-Gorgani

series ordinal

3

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14 October 2017

language of work or name

English

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publication date

25 July 2008

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14 October 2017

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14 October 2017

95

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14 October 2017

9

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14 October 2017

4139-4147

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Effect of polyamines on the structure, thermal stability and 2,2,2-trifluoroethanol-induced aggregation of alpha-chymotrypsin.

14 October 2017

1 reference

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Structural models of amyloid-like fibrils

3 June 2018

1 reference

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Insight into the structure of amyloid fibrils from the analysis of globular proteins

3 June 2018

1 reference

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Aspects on human amyloid forms and their fibril polypeptides

3 June 2018

1 reference

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Effect of hexafluoroisopropanol alcohol on the structure of melittin: a molecular dynamics simulation study

3 June 2018

1 reference

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Amyloid fibril formation by a partially structured intermediate state of alpha-chymotrypsin.

3 June 2018

1 reference

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Conformational constraints for amyloid fibrillation: the importance of being unfolded

3 June 2018

1 reference

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Structure and solvation of melittin in 1,1,1,3,3,3-hexafluoro-2-propanol/water

3 June 2018

1 reference

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Trifluoroethanol-induced beta --> alpha transition in beta-lactoglobulin: hydration and cosolvent binding studied by 2H, 17O, and 19F magnetic relaxation dispersion.

3 June 2018

1 reference

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Molecular dynamics simulation of the SH3 domain aggregation suggests a generic amyloidogenesis mechanism

3 June 2018

1 reference

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Molecular dynamics simulations of alanine rich beta-sheet oligomers: Insight into amyloid formation

3 June 2018

1 reference

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Mechanism by which 2,2,2-trifluoroethanol/water mixtures stabilize secondary-structure formation in peptides: a molecular dynamics study

3 June 2018

1 reference

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3 June 2018

1 reference

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Solvation phenomena of a tetrapeptide in water/trifluoroethanol and water/ethanol mixtures: a diffusion NMR, intermolecular NOE, and molecular dynamics study

3 June 2018

1 reference

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A possible role for pi-stacking in the self-assembly of amyloid fibrils

3 June 2018

1 reference

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Trifluoroethanol and colleagues: cosolvents come of age. Recent studies with peptides and proteins.

3 June 2018

1 reference

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Designing conditions for in vitro formation of amyloid protofilaments and fibrils

3 June 2018

1 reference

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Trifluoroethanol-induced conformational transitions of proteins: insights gained from the differences between alpha-lactalbumin and ribonuclease A.

3 June 2018

1 reference

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Conformational transitions provoked by organic solvents in beta-lactoglobulin: can a molten globule like intermediate be induced by the decrease in dielectric constant?

3 June 2018

1 reference

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VMD: visual molecular dynamics

3 June 2018

1 reference

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Local and nonlocal interactions in globular proteins and mechanisms of alcohol denaturation

3 June 2018

1 reference

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A simple method for displaying the hydropathic character of a protein

3 June 2018

1 reference

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Calculations of electrostatic interactions in biological systems and in solutions

3 June 2018

1 reference

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3 June 2018

1 reference

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Comparison of the crystal structures of chymotrypsinogen-A and α-chymotrypsin

3 June 2018

1 reference

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Thermodynamics of Unfolding of Lysozyme in Aqueous Alcohol Solutions

3 June 2018

1 reference

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Rotational correlation time of spin-labeled alpha-chymotrypsin.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2567952

Structure of alpha-chymotrypsin refined at 1.68 A resolution

3 June 2018

1 reference

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Characterization of the unfolding of ribonuclease A in aqueous methanol solvents

3 June 2018

1 reference

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Effect of trifluoroethanol on protein secondary structure: an NMR and CD study using a synthetic actin peptide

3 June 2018

1 reference

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Solvent dielectric effects on protein dynamics

3 June 2018

1 reference

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Interactions of hexafluoro-2-propanol with the Trp-cage peptide.

3 June 2018

1 reference

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Computational approaches to fibril structure and formation

26 November 2018

1 reference

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Molecular dynamics simulation of the aggregation of the core-recognition motif of the islet amyloid polypeptide in explicit water

26 November 2018

1 reference

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Partially folded intermediates as critical precursors of light chain amyloid fibrils and amorphous aggregates.

26 November 2018

1 reference

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Group additive contributions to the alcohol-induced alpha-helix formation of melittin: implication for the mechanism of the alcohol effects on proteins.

26 November 2018

1 reference

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Hydrophobic solvation in aqueous trifluoroethanol solution

26 November 2018

1 reference

12 December 2020

Solvent polarity-dependent structural refolding: A CD and NMR study of a 15 residue peptide

1 reference

12 December 2020

Predicted and trifluoroethanol-induced α-helicity of polypeptides

1 reference

12 December 2020

A model for the interaction of trifluoroethanol with peptides and proteins

1 reference

12 December 2020

Trifluoroethanol-induced conformational transition of hen egg-white lysozyme studied by small-angle X-ray scattering

1 reference

12 December 2020

Trifluoroethanol promotes helix formation by destabilizing backbone exposure: desolvation rather than native hydrogen bonding defines the kinetic pathway of dimeric coiled coil folding

1 reference

12 December 2020

Role of electrostatic interactions in 2,2,2-trifluoroethanol-induced structural changes and aggregation of α-chymotrypsin

1 reference

12 December 2020

The Effect of Aliphatic Alcohols on the Helix-Coil Transition of Poly-l-ornithine and Poly-l-glutamic Acid

1 reference

12 December 2020

Low-ultraviolet circular dichroism spectroscopy of sequential peptides 1-63, 64-95, 96-128, and 129-168 derived from myelin basic protein of rabbit

1 reference

12 December 2020

Crystal and molecular structure of the bovine α-chymotrypsin-eglin c complex at 2.0 Å resolution

1 reference

12 December 2020

Quantitative determination of helical propensities from trifluoroethanol titration curves

1 reference

12 December 2020

NMR solution structure of the isolated N-terminal fragment of protein-G B1 domain. Evidence of trifluoroethanol induced native-like beta-hairpin formation

1 reference

12 December 2020

10.1529/BIOPHYSJ.108.132407

Identifiers

DOI

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release_tx7pn3p5bjb2tiq7dkvlng42ni

14 October 2017

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Fatcat

https://api.fatcat.wiki/v0/release/tx7pn3p5bjb2tiq7dkvlng42ni

24 November 2022

mapped directly with Wikidata item

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14 October 2017

PubMed publication ID

18658209

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