QMEANclust: estimation of protein model quality by combining a composite scoring function with structural density information. (Q30377311)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19457232%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

title

QMEANclust: estimation of protein model quality by combining a composite scoring function with structural density information (English)

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28 January 2020

2

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28 January 2020

Silvio C.E. Tosatto

series ordinal

3

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28 January 2020

author name string

Pascal Benkert

series ordinal

1

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28 January 2020

publication date

20 May 2009

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19457232%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

published in

BMC Structural Biology

1 reference

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28 January 2020

volume

9

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28 January 2020

page(s)

35

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https://scigraph.springernature.com/pub.10.1186/1472-6807-9-35

28 January 2020

exact match

0 references

cites work

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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Clustering of low-energy conformations near the native structures of small proteins

20 June 2018

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20 June 2018

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20 June 2018

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Comparative protein modeling by satisfaction of spatial restraints

20 June 2018

1 reference

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Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Errors in protein structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Recognition of errors in three-dimensional structures of proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

20 June 2018

1 reference

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The relation between the divergence of sequence and structure in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

20 June 2018

1 reference

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A new approach to protein fold recognition

20 June 2018

1 reference

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Assessment of protein models with three-dimensional profiles

20 June 2018

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Towards an automatic method of predicting protein structure by homology: an evaluation of suboptimal sequence alignments

20 June 2018

1 reference

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Threading without optimizing weighting factors for scoring function.

20 June 2018

1 reference

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Estimating quality of template-based protein models by alignment stability.

26 November 2018

1 reference

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Identification of correct regions in protein models using structural, alignment, and consensus information

26 November 2018

1 reference

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TASSER: an automated method for the prediction of protein tertiary structures in CASP6.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Predicting reliable regions in protein alignments from sequence profiles.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Identifying native-like protein structures using physics-based potentials

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2709111

Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19457232

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1472-6807-9-35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19457232%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

28 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19457232%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

1 reference