Membrane binding of Escherichia coli RNase E catalytic domain stabilizes protein structure and increases RNA substrate affinity (Q30415488)

11 August 2017

Membrane binding of Escherichia coli RNase E catalytic domain stabilizes protein structure and increases RNA substrate affinity (English)

1 reference

11 August 2017

0 references

Oleg N Murashko

1

1 reference

11 August 2017

Vladimir R Kaberdin

series ordinal

2

1 reference

11 August 2017

Sue Lin-Chao

series ordinal

3

1 reference

11 August 2017

language of work or name

English

0 references

publication date

16 April 2012

1 reference

Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

1 reference

11 August 2017

109

1 reference

11 August 2017

18

1 reference

11 August 2017

7019-7024

1 reference

Composition and conservation of the mRNA-degrading machinery in bacteria

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Protein secondary structure analyses from circular dichroism spectroscopy: methods and reference databases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Studies of the RNA degradosome-organizing domain of the Escherichia coli ribonuclease RNase E.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

An mRNA degrading complex in Rhodobacter capsulatus.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Electrostatics of nanosystems: application to microtubules and the ribosome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Membrane-induced conformational change in human apolipoprotein H.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Membrane-induced conformational change of proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half, which is sufficient for degradosome assembly

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

RNase E: still a wonderfully mysterious enzyme.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Proteins associated with RNase E in a multicomponent ribonucleolytic complex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

A DEAD-box RNA helicase in the Escherichia coli RNA degradosome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The N-terminal domain of the rne gene product has RNase E activity and is non-overlapping with the arginine-rich RNA-binding site

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

RNase E activity is conferred by a single polypeptide: overexpression, purification, and properties of the ams/rne/hmp1 gene product

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Effects of nucleotide sequence on the specificity of rne-dependent and RNase E-mediated cleavages of RNA I encoded by the pBR322 plasmid.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

A+U content rather than a particular nucleotide order determines the specificity of RNase E cleavage

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmic reticulum

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The electrostatic properties of membranes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Location of the RNA-processing enzymes RNase III, RNase E and RNase P in the Escherichia coli cell.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The rate of processing and degradation of antisense RNAI regulates the replication of ColE1-type plasmids in vivo

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Cloning and analysis of the entire Escherichia coli ams gene. ams is identical to hmp1 and encodes a 114 kDa protein that migrates as a 180 kDa protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

The interaction of phospholipid membranes and detergents with glutamate dehydrogenase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Quaternary structure and biochemical properties of mycobacterial RNase E/G.

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

Retention of core catalytic functions by a conserved minimal ribonuclease E peptide that lacks the domain required for tetramer formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

HIV-1 Nef membrane association depends on charge, curvature, composition and sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

The RING domains of the promyelocytic leukemia protein PML and the arenaviral protein Z repress translation by directly inhibiting translation initiation factor eIF4E.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

Poly(A)- and poly(U)-specific RNA 3' tail shortening by E. coli ribonuclease E.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

Site-specific RNase E cleavage of oligonucleotides and inhibition by stem-loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

Free radical intermediate in the N -demethylation of aminopyrine by horseradish peroxidase-hydrogen peroxide

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1120181109

The RNase E of Escherichia coli is a membrane-binding protein

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3344982

Conformational changes due to membrane binding and channel formation by staphylococcal alpha-toxin

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22509045

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A developmentally regulated Streptomyces endoribonuclease resembles ribonuclease E of Escherichia coli

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22509045

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1120181109

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

22509045

1 reference