Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis. (Q30416155)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

meta-analysis

0 references

title

Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

primary sclerosing cholangitis

29 February 2020

main subject

ascending cholangitis

0 references

1 reference

7

1 reference

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29 February 2020

Johannes Roksund Hov

2

1 reference

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Nadezhda Tsankova Doncheva

29 February 2020

6

1 reference

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29 February 2020

Tobias J. Weismüller

9

1 reference

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29 February 2020

Pietro Invernizzi

11

1 reference

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29 February 2020

Gideon M. Hirschfield

12

1 reference

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29 February 2020

Albert Pares

14

1 reference

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29 February 2020

Piotr Milkiewicz

18

1 reference

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29 February 2020

Christoph Schramm

20

1 reference

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29 February 2020

Markus M Nöthen

24

1 reference

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29 February 2020

Stefan Herms

25

1 reference

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29 February 2020

Juliane Winkelmann

26

1 reference

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29 February 2020

Mitja Mitrovič

27

1 reference

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29 February 2020

Janna Saarela

34

1 reference

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29 February 2020

Ruslan Dorfman

36

1 reference

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29 February 2020

Domenico Alvaro

37

1 reference

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29 February 2020

Suna Onengut

39

1 reference

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29 February 2020

Inke R. König

46

1 reference

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29 February 2020

Isis Ricaño-Ponce

50

1 reference

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29 February 2020

David A van Heel

51

1 reference

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29 February 2020

Richard Duerr

58

1 reference

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29 February 2020

Leonid Padyukov

59

1 reference

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29 February 2020

Cisca Wijmenga

68

1 reference

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29 February 2020

Séverine Vermeire

70

1 reference

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29 February 2020

John D. Rioux

74

1 reference

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29 February 2020

Martti Färkkilä

79

1 reference

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29 February 2020

Carl A Anderson

85

1 reference

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29 February 2020

47

Kristian Hveem

1 reference

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29 February 2020

78

Michael P Manns

1 reference

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29 February 2020

0 references

8

Rinse K Weersma

1 reference

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29 February 2020

80

Anders M Dale

1 reference

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29 February 2020

42

Andrew J Schork

1 reference

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29 February 2020

57

Mark S Silverberg

1 reference

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29 February 2020

77

Stefan Schreiber

1 reference

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29 February 2020

76

Judy Cho

1 reference

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29 February 2020

Christopher L Bowlus

67

1 reference

ORCID Public Data File 2021

Jean-Paul Achkar

63

Jean-Paul Achkar

1 reference

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29 February 2020

86

Tom H Karlsen

1 reference

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29 February 2020

55

Espen Melum

1 reference

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29 February 2020

64

Kirsten Muri Boberg

1 reference

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29 February 2020

3

Trine Folseraas

1 reference

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29 February 2020

75

Annika Bergquist

1 reference

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29 February 2020

84

Andre Franke

1 reference

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29 February 2020

56

Morten H Vatn

1 reference

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29 February 2020

29

Cyriel Y Ponsioen

1 reference

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29 February 2020

62

Vito Annese

1 reference

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29 February 2020

48

Isabelle Cleynen

1 reference

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29 February 2020

60

Stephan Brand

1 reference

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29 February 2020

10

Bertus Eksteen

1 reference

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29 February 2020

44

Ingo Thomsen

1 reference

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International IBD Genetics Consortium

29 February 2020

87

International IBD Genetics Consortium

1 reference

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29 February 2020

4

Eva Ellinghaus

1 reference

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29 February 2020

40

Stephen S Rich

1 reference

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29 February 2020

17

Brian D Juran

1 reference

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29 February 2020

13

Daniel Nils Gotthardt

1 reference

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29 February 2020

52

Einar Björnsson

1 reference

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29 February 2020

Hanns-Ulrich Marschall

65

Hanns-Ulrich Marschall

1 reference

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29 February 2020

32

Andreas Teufel

1 reference

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29 February 2020

31

Martina Sterneck

1 reference

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29 February 2020

69

Erik Schrumpf

1 reference

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29 February 2020

Konstantinos N Lazaridis

82

Konstantinos N Lazaridis

1 reference

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29 February 2020

Javier Gutierrez-Achury

49

Javier Gutierrez-Achury

1 reference

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29 February 2020

28

Felix Braun

1 reference

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29 February 2020

5

Simon M Rushbrook

1 reference

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29 February 2020

38

Annarosa Floreani

1 reference

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29 February 2020

Olivier Chazouilleres

66

Olivier Chazouillères

1 reference

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International PSC Study Group

29 February 2020

83

International PSC Study Group

1 reference

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29 February 2020

author name string

Jimmy Z Liu

1

1 reference

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29 February 2020

Tejas Shah

16

1 reference

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29 February 2020

Christian Rust

19

1 reference

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29 February 2020

Tobias Müller

21

1 reference

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29 February 2020

Brijesh Srivastava

22

1 reference

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29 February 2020

Georgios Dalekos

23

1 reference

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29 February 2020

Peter J P Croucher

30

1 reference

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29 February 2020

Andrew L Mason

33

1 reference

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29 February 2020

Wesley K Thompson

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Sigrid Næss

43

1 reference

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29 February 2020

Gabriele Mayr

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Richard N Sandford

53

1 reference

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29 February 2020

Peter R Durie

54

1 reference

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29 February 2020

Miquel Sans

61

1 reference

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29 February 2020

Mario Albrecht

71

1 reference

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29 February 2020

UK-PSCSC Consortium

72

1 reference

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29 February 2020

Roger W Chapman

81

1 reference

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29 February 2020

David Ellinghaus

15

1 reference

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29 February 2020

Virpi Leppa

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

John D Rioux

73

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

language of work or name

English

0 references

publication date

21 April 2013

1 reference

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29 February 2020

1 reference

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29 February 2020

volume

45

1 reference

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29 February 2020

issue

6

1 reference

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29 February 2020

page(s)

670-675

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

Identification of 15 new psoriasis susceptibility loci highlights the role of innate immunity.

29 February 2020

cites work

1 reference

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Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease

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Dense fine-mapping study identifies new susceptibility loci for primary biliary cirrhosis

20 June 2018

1 reference

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Architecture of the human regulatory network derived from ENCODE data

20 June 2018

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A mixed-model approach for genome-wide association studies of correlated traits in structured populations

20 June 2018

1 reference

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Genome-wide association analysis in primary sclerosing cholangitis and ulcerative colitis identifies risk loci at GPR35 and TCF4

20 June 2018

1 reference

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Extended analysis of a genome-wide association study in primary sclerosing cholangitis detects multiple novel risk loci

20 June 2018

1 reference

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Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis

20 June 2018

1 reference

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Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease

20 June 2018

1 reference

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A robust clustering algorithm for identifying problematic samples in genome-wide association studies

20 June 2018

1 reference

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Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Meta-analysis of new genome-wide association studies of colorectal cancer risk

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

The transcription factor NR4A1 (Nur77) controls bone marrow differentiation and the survival of Ly6C- monocytes

20 June 2018

1 reference

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Deciphering the genetic predisposition to primary sclerosing cholangitis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Electrostatic modifications of the human leukocyte antigen-DR P9 peptide-binding pocket and susceptibility to primary sclerosing cholangitis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Promise and pitfalls of the Immunochip

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Genome-wide association analysis in primary sclerosing cholangitis identifies two non-HLA susceptibility loci

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

A map of human genome variation from population-scale sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Evoker: a visualization tool for genotype intensity data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Genome-wide association analyses of North American Rheumatoid Arthritis Consortium and Framingham Heart Study data utilizing genome-wide linkage results

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Genome-wide association analysis in primary sclerosing cholangitis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

FunSimMat update: new features for exploring functional similarity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Detecting shared pathogenesis from the shared genetics of immune-related diseases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

The role of HLA-DQ8 beta57 polymorphism in the anti-gluten T-cell response in coeliac disease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

PLINK: a tool set for whole-genome association and population-based linkage analyses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Population structure and eigenanalysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

A new measure for functional similarity of gene products based on Gene Ontology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Primary Sclerosing Cholangitis, Inflammatory Bowel Disease, and Colon Cancer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Phosphorylation of histone deacetylase 7 by protein kinase D mediates T cell receptor-induced Nur77 expression and apoptosis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Gene map of the extended human MHC.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Cytoscape: a software environment for integrated models of biomolecular interaction networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

HDAC7, a thymus-specific class II histone deacetylase, regulates Nur77 transcription and TCR-mediated apoptosis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

HLA-DR and -DQ phenotypes in inflammatory bowel disease: a meta-analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

HLA class II haplotypes in primary sclerosing cholangitis patients from five European populations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Natural history and prognostic factors in 305 Swedish patients with primary sclerosing cholangitis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Comparing the areas under two or more correlated receiver operating characteristic curves: a nonparametric approach

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3667736

Histone deacetylase 7 regulates cell survival and TCR signaling in CD4/CD8 double-positive thymocytes

20 June 2018

1 reference

The positive false discovery rate: a Bayesian interpretation and the q -value

21 January 2018

1 reference

Evaluating the heritability explained by known susceptibility variants: a survey of ten complex diseases

21 January 2018

1 reference

Increased Risk of Primary Sclerosing Cholangitis and Ulcerative Colitis in First-Degree Relatives of Patients With Primary Sclerosing Cholangitis

21 January 2018

1 reference

Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies

21 January 2018

1 reference

Stratified false discovery control for large-scale hypothesis testing with application to genome-wide association studies

21 January 2018

1 reference

HLA-Cw*1202-B*5201-DRB1*1502 haplotype increases risk for ulcerative colitis but reduces risk for Crohn's disease

21 January 2018

1 reference

12 December 2020

Update on primary sclerosing cholangitis

1 reference

12 December 2020

Primary sclerosing cholangitis: a long-term follow-up study

1 reference

12 December 2020

Fine mapping and replication of genetic risk loci in primary sclerosing cholangitis

1 reference

12 December 2020

HLA antigens and immunoregulatory T cells in ulcerative colitis associated with hepatobiliary disease

1 reference

12 December 2020

Increased frequency of autoimmune diseases in patients with primary sclerosing cholangitis

1 reference

12 December 2020

Natural history and prognostic variables in primary sclerosing cholangitis

1 reference

12 December 2020

Large-scale association analysis identifies new risk loci for coronary artery disease

1 reference

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NG.2616

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23603763%20AND%20SRC:MED&resulttype=core&format=json