Protein structure refinement based on paramagnetic NMR shifts: applications to wild-type and mutant forms of cytochrome c. (Q30418438)

13 August 2017

Protein structure refinement based on paramagnetic NMR shifts: applications to wild-type and mutant forms of cytochrome c. (English)

1 reference

13 August 2017

M Gochin

1

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13 August 2017

H Roder

series ordinal

2

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13 August 2017

1 February 1995

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13 August 2017

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13 August 2017

4

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13 August 2017

2

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13 August 2017

296-305

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Exploring the limits of precision and accuracy of protein structures determined by nuclear magnetic resonance spectroscopy.

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Intrinsic nature of the three-dimensional structure of proteins as determined by distance geometry with good sampling properties.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Exploring the interface between the N- and C-terminal helices of cytochrome c by random mutagenesis within the C-terminal helix

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Novel heteronuclear methods of assignment transfer from a diamagnetic to a paramagnetic protein: application to rat cytochrome b5.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Solution structure of horse heart ferrocytochrome c determined by high-resolution NMR and restrained simulated annealing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Use of lanthanide-induced nuclear magnetic resonance shifts for determination of protein structure in solution: EF calcium binding site of carp parvalbumin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Quantitative Determination of Mononucleotide Conformations in Solution using Lanthanide Ion Shift and Broadening NMR Probes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Evaluation of dipolar nuclear magnetic resonance shifts in low-spin hemin systems: ferricytochrome c and metmyoglobin cyanide.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Rapid and efficient site-specific mutagenesis without phenotypic selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Comparison of the solution and crystal structures of mitochondrial cytochrome c. Analysis of paramagnetic shifts in the nuclear magnetic resonance spectrum of ferricytochrome c.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Proton resonance assignments of horse ferrocytochrome c.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

An analysis of pseudocontact shifts and their relationship to structural features of the redox states of cytochrome b5.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

High-resolution three-dimensional structure of horse heart cytochrome c

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Redox-dependent structure change and hyperfine nuclear magnetic resonance shifts in cytochrome c.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Chemical exchange in two dimensions in the 1H NMR assignment of cytochrome c

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Metal binding and folding properties of a minimalist Cys2His2 zinc finger peptide

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

NMR structure determination in solution: a critique and comparison with X-ray crystallography

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Oxidation state-dependent conformational changes in cytochrome c

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Evolutionary change of the heme C electronic structure: Ferricytochrome c-551 from Pseudomonas aeruginosa and horse heart ferricytochrome c

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

NMR determination of the orientation of the magnetic susceptibility tensor in cyanometmyoglobin: a new probe of steric tilt of bound ligand

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143054

Electronic structure of cyanide complexes of hemes and heme proteins

26 November 2018

1 reference

12 December 2020

Conformation change of cytochrome c. I. Ferrocytochrome c structure refined at 1.5 A resolution

1 reference

12 December 2020

Conformation change of cytochrome c. II. Ferricytochrome c refinement at 1.8 A and comparison with the ferrocytochrome structure

1 reference

12 December 2020

Proton resonance assignments of horse ferricytochrome c

1 reference

12 December 2020

A tetrahedral zinc(II)-binding site introduced into a designed protein

1 reference

12 December 2020

Comparison of reduced and oxidized yeast iso-1-cytochrome c using proton paramagnetic shifts

1 reference

12 December 2020

Enhanced thermodynamic stabilities of yeast iso-1-cytochromes c with amino acid replacements at positions 52 and 102

1 reference

12 December 2020

Secondary and tertiary structural effects on protein NMR chemical shifts: an ab initio approach

1 reference

12 December 2020

Metal ion-dependent modulation of the dynamics of a designed protein

1 reference

12 December 2020

A noncovalent peptide complex as a model for an early folding intermediate of cytochrome c

1 reference

12 December 2020

Investigation of the structure of oxidized Pseudomonas aeruginosa cytochrome c-551 by NMR: comparison of observed paramagnetic shifts and calculated pseudocontact shifts

1 reference

12 December 2020

Design and synthesis of multi-haem proteins

1 reference

12 December 2020

Identifiers

DOI

10.1002/PRO.5560040216

1 reference

release_xbixpdbaf5fg5nboqpnt3rqs3m

13 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xbixpdbaf5fg5nboqpnt3rqs3m

24 November 2022

mapped directly with Wikidata item

1 reference

13 August 2017

PubMed publication ID

7757018

1 reference