Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1. (Q30427216)

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English	Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1.	scientific article

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3 November 2019

Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1 (English)

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3 November 2019

molecular dynamics simulation

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Robert E. Bruccoleri

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Donna Bassolino-Klimas

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H Li

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D Monleon

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C Abate-Shen

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G T Montelione

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1 May 1997

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Protein Science

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3 November 2019

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956-970

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3 November 2019

Structural organization and sequence of the homeotic gene Antennapedia of Drosophila melanogaster

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20 June 2018

Comparison of MSX-1 and MSX-2 suggests a molecular basis for functional redundancy

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20 June 2018

Simulated annealing with restrained molecular dynamics using a flexible restraint potential: theory and evaluation with simulated NMR constraints.

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Simulated annealing with restrained molecular dynamics using CONGEN: energy refinement of the NMR solution structures of epidermal and type-alpha transforming growth factors

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20 June 2018

Homeodomain interactions

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Hydration and DNA recognition by homeodomains

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RNA binding and translational suppression by bicoid

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RNA recognition and translational regulation by a homeodomain protein.

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The X-ray structure of an atypical homeodomain present in the rat liver transcription factor LFB1/HNF1 and implications for DNA binding

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The three-dimensional NMR-solution structure of the polypeptide fragment 195-286 of the LFB1/HNF1 transcription factor from rat liver comprises a nonclassical homeodomain.

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Nucleotides flanking a conserved TAAT core dictate the DNA binding specificity of three murine homeodomain proteins

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Solution structure of a POU-specific homeodomain: 3D-NMR studies of human B-cell transcription factor Oct-2

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10.1002/PRO.5560060502

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3 November 2019

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3 November 2019

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3 November 2019

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