JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles (Q30485768)

18 August 2017

JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles (English)

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18 August 2017

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11

Wah Chiu

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18 August 2017

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Junjie Zhang

1

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18 August 2017

Natsuko Nakamura

2

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18 August 2017

Yuko Shimizu

3

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18 August 2017

Nathan Liang

4

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18 August 2017

Xiangan Liu

5

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18 August 2017

Joanita Jakana

6

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18 August 2017

Michael P Marsh

7

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18 August 2017

Christopher R Booth

8

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18 August 2017

Takao Shinkawa

9

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18 August 2017

Munetaka Nakata

10

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18 August 2017

language of work or name

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30 September 2008

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Journal of Structural Biology

18 August 2017

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18 August 2017

165

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18 August 2017

1

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18 August 2017

1-9

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Achievable resolution from images of biological specimens acquired from a 4k x 4k CCD camera in a 300-kV electron cryomicroscope

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

3.88 Å structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

De novo backbone trace of GroEL from single particle electron cryomicroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Detection and separation of heterogeneity in molecular complexes by statistical analysis of their two-dimensional projections.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Modular software platform for low-dose electron microscopy and tomography

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Essential function of the built-in lid in the allosteric regulation of eukaryotic and archaeal chaperonins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Identification of secondary structure elements in intermediate-resolution density maps

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

A method of focused classification, based on the bootstrap 3D variance analysis, and its application to EF-G-dependent translocation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Automated electron microscope tomography using robust prediction of specimen movements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Automated molecular microscopy: the new Leginon system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Automated acquisition of cryo-electron micrographs for single particle reconstruction on an FEI Tecnai electron microscope

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

TOM software toolbox: acquisition and analysis for electron tomography.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Visualization of alpha-helical features in a density map constructed using 9 molecular images of the 1.8 MDa icosahedral core of pyruvate dehydrogenase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Automated image acquisition and processing using a new generation of 4K x 4K CCD cameras for cryo electron microscopic studies of macromolecular assemblies.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Leginon: an automated system for acquisition of images from vitreous ice specimens.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

EMAN: semiautomated software for high-resolution single-particle reconstructions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Disentangling conformational states of macromolecules in 3D-EM through likelihood optimization.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

Estimation of variance in single-particle reconstruction using the bootstrap technique.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

A 9 angstroms single particle reconstruction from CCD captured images on a 200 kV electron cryomicroscope

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2634810

A 11.5 A single particle reconstruction of GroEL using EMAN

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18926912

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Local average intensity-based method for identifying spherical particles in electron micrographs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18926912

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JSB.2008.09.006

1 reference

18 August 2017

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18 August 2017

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