In silico identification of transcription factors in Medicago sativa using available transcriptomic resources (Q30486766)

22 June 2017

title

In silico identification of transcription factors in Medicago sativa using available transcriptomic resources (English)

1 reference

22 June 2017

0 references

1 reference

1 reference

2

Jonathan Shao

1 reference

22 June 2017

Olga A Postnikova

1

1 reference

22 June 2017

Lev G Nemchinov

series ordinal

3

1 reference

22 June 2017

language of work or name

1 reference

21 February 2014

1 reference

Molecular Genetics and Genomics

22 June 2017

published in

1 reference

22 June 2017

volume

289

1 reference

22 June 2017

issue

3

1 reference

22 June 2017

page(s)

457-468

1 reference

The B-3 ethylene response factor MtERF1-1 mediates resistance to a subset of root pathogens in Medicago truncatula without adversely affecting symbiosis with rhizobia

22 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Essential role for the SANT domain in the functioning of multiple chromatin remodeling enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

De novo transcriptome assembly of RNA-Seq reads with different strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Dual involvement of a Medicago truncatula NAC transcription factor in root abiotic stress response and symbiotic nodule senescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Genome-wide analysis of the MYB transcription factor superfamily in soybean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

MYB transcription factors in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The WRKY superfamily of plant transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

CD-HIT: accelerated for clustering the next-generation sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

MtbHLH1, a bHLH transcription factor involved in Medicago truncatula nodule vascular patterning and nodule to plant metabolic exchanges.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Complex patterns of autopolyploid evolution in alfalfa and allies (Medicago sativa; Leguminosae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

CD-HIT Suite: a web server for clustering and comparing biological sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Coding limits on the number of transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signalling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Genome-wide classification and expression analysis of MYB transcription factor families in rice and Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Legume transcription factor genes: what makes legumes so special?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The transcription factor MtSERF1 of the ERF subfamily identified by transcriptional profiling is required for somatic embryogenesis induced by auxin plus cytokinin in Medicago truncatula.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

CDD: a Conserved Domain Database for the functional annotation of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Next-generation transcriptome assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Ethylene-responsive AP2/ERF transcription factor MACD1 participates in phytotoxin-triggered programmed cell death.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

An ERF transcription factor in Medicago truncatula that is essential for Nod factor signal transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

OrfPredictor: predicting protein-coding regions in EST-derived sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Transcription reprogramming during root nodule development in Medicago truncatula

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Genome-wide analysis of the ERF gene family in Arabidopsis and rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

NAC transcription factors: structurally distinct, functionally diverse

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Identification and in silico characterization of soybean trihelix-GT and bHLH transcription factors involved in stress responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Origin and diversification of basic-helix-loop-helix proteins in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Analysis of the alfalfa root transcriptome in response to salinity stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Interactions between the R2R3-MYB transcription factor, AtMYB61, and target DNA binding sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

NAC proteins: regulation and role in stress tolerance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

InterProScan: protein domains identifier

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Molecular evolution of the Myb family of transcription factors: evidence for polyphyletic origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Tobacco transcription factors: novel insights into transcriptional regulation in the Solanaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

WRKY transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The R2R3-MYB gene family in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Optimization of de novo transcriptome assembly from next-generation sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The Arabidopsis basic/helix-loop-helix transcription factor family.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Legume transcription factors: global regulators of plant development and response to the environment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatula.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

EFD Is an ERF transcription factor involved in the control of nodule number and differentiation in Medicago truncatula

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Mutation of WRKY transcription factors initiates pith secondary wall formation and increases stem biomass in dicotyledonous plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

DNA-binding domains of plant-specific transcription factors: structure, function, and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Alfalfa benefits from Medicago truncatula: the RCT1 gene from M. truncatula confers broad-spectrum resistance to anthracnose in alfalfa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

Sequence-specific DNA recognition by the Myb-like domain of plant telomeric protein RTBP1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

InterProScan--an integration platform for the signature-recognition methods in InterPro

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00438-014-0823-7

An NAC transcription factor orchestrates multiple features of cell wall development in Medicago truncatula

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24556904

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00438-014-0823-7

1 reference

22 June 2017

1 reference