SMaSH: a benchmarking toolkit for human genome variant calling (Q30487027)

16 October 2017

SMaSH: a benchmarking toolkit for human genome variant calling (English)

1 reference

16 October 2017

9

Michael I Jordan

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16 October 2017

Ameet Talwalkar

1

1 reference

16 October 2017

Jesse Liptrap

2

1 reference

16 October 2017

Julie Newcomb

3

1 reference

16 October 2017

Christopher Hartl

4

1 reference

16 October 2017

Jonathan Terhorst

5

1 reference

16 October 2017

Kristal Curtis

6

1 reference

16 October 2017

Ma'ayan Bresler

7

1 reference

16 October 2017

Yun S Song

8

1 reference

16 October 2017

David Patterson

10

1 reference

16 October 2017

language of work or name

English

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publication date

3 June 2014

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16 October 2017

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16 October 2017

30

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16 October 2017

19

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16 October 2017

2787-2795

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The new date, new format, new goals and new sponsor of the Archon Genomics X PRIZE competition

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Assemblathon 1: a competitive assessment of de novo short read assembly methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Sequence-based characterization of structural variation in the mouse genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

A framework for variation discovery and genotyping using next-generation DNA sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Genome structural variation discovery and genotyping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

The $1,000 genome, the $100,000 analysis?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

A human genome structural variation sequencing resource reveals insights into mutational mechanisms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

A map of human genome variation from population-scale sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Dindel: accurate indel calls from short-read data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Integrating common and rare genetic variation in diverse human populations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Characterization of missing human genome sequences and copy-number polymorphic insertions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

The Sequence Alignment/Map format and SAMtools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Lineage-specific biology revealed by a finished genome assembly of the mouse

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

A second generation human haplotype map of over 3.1 million SNPs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

The diploid genome sequence of an individual human

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4173010

Next-generation sequencing data interpretation: enhancing reproducibility and accessibility

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU345

10.1093/BIOINFORMATICS/BTU345

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/TalwalkarLNHTCBSJP14

16 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

16 October 2017

PubMed publication ID

24894505

1 reference