Experimental evidence for a frustrated energy landscape in a three-helix-bundle protein family (Q30493974)

15 September 2017

Experimental evidence for a frustrated energy landscape in a three-helix-bundle protein family (English)

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15 September 2017

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Alessandro Borgia

8

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author name string

Beth G Wensley

1

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15 September 2017

Sarah Batey

2

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15 September 2017

Fleur A C Bone

3

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15 September 2017

Zheng Ming Chan

4

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15 September 2017

Nuala R Tumelty

5

1 reference

15 September 2017

Annette Steward

6

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15 September 2017

Lee Gyan Kwa

7

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15 September 2017

Jane Clarke

9

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15 September 2017

language of work or name

English

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publication date

1 February 2010

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15 September 2017

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15 September 2017

463

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15 September 2017

7281

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15 September 2017

685-688

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Different members of a simple three-helix bundle protein family have very different folding rate constants and fold by different mechanisms

15 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Measuring internal friction of an ultrafast-folding protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Estimating free-energy barrier heights for an ultrafast folding protein from calorimetric and kinetic data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Consequences of localized frustration for the folding mechanism of the IM7 protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Pathogenic proline mutation in the linker between spectrin repeats: disease caused by spectrin unfolding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Protein folding is slaved to solvent motions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Spectrin R16: broad energy barrier or sequential transition states?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Variations in the fast folding rates of the lambda-repressor: a hybrid molecular dynamics study

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Unifying features in protein-folding mechanisms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Apparent two-state tendamistat folding is a sequential process along a defined route

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Characterisation of the transition states for protein folding: towards a new level of mechanistic detail in protein engineering analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

From snapshot to movie: phi analysis of protein folding transition states taken one step further

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

A simple model for calculating the kinetics of protein folding from three-dimensional structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Structural changes in the transition state of protein folding: alternative interpretations of curved chevron plots

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Limited internal friction in the rate-limiting step of a two-state protein folding reaction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Contact order, transition state placement and the refolding rates of single domain proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Diffusion control in an elementary protein folding reaction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Determination and analysis of urea and guanidine hydrochloride denaturation curves

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Diffusion in a rough potential

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Role of diffusion in the folding of the alpha subunit of tryptophan synthase from Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

The role of solvent viscosity in the dynamics of protein conformational changes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Kinetic coupling between protein folding and prolyl isomerization. I. Theoretical models

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Diffusional barrier in the unfolding of a small protein.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

The folding pathway of spectrin R17 from experiment and simulation: using experimentally validated MD simulations to characterize States hinted at by experiment

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain α-Spectrin

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

The folding of spectrin domains II: phi-value analysis of R16.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2851140

Folding at the speed limit

26 November 2018

1 reference

12 December 2020

Internal friction controls the speed of protein folding from a compact configuration

1 reference

12 December 2020

High-energy channeling in protein folding

1 reference

12 December 2020

The changing nature of the protein folding transition state: implications for the shape of the free-energy profile for folding

1 reference

12 December 2020

Upper limit of the time scale for diffusion and chain collapse in chymotrypsin inhibitor 2

1 reference

12 December 2020

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

1 reference

12 December 2020

Identifiers

DOI

10.1038/NATURE08743

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Dimensions Publication ID

15 September 2017

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1 reference

15 September 2017

PubMed publication ID

20130652

1 reference