Force unfolding kinetics of RNA using optical tweezers. II. Modeling experiments. (Q30494669)

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25 December 2019

title

Force unfolding kinetics of RNA using optical tweezers. II. Modeling experiments (English)

1 reference

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25 December 2019

0 references

5

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25 December 2019

Jin-Der Wen

2

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25 December 2019

author name string

M Manosas

1

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25 December 2019

P T X Li

3

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25 December 2019

S B Smith

4

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25 December 2019

I Tinoco

6

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25 December 2019

F Ritort

7

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25 December 2019

language of work or name

English

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publication date

9 February 2007

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25 December 2019

number of pages

12

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inferred from page(s)

published in

Biophysical Journal

1 reference

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25 December 2019

volume

92

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25 December 2019

issue

9

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25 December 2019

page(s)

3010-3021

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Single-molecule experiments in biological physics: methods and applications

25 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Design for fully steerable dual-trap optical tweezers.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Force unfolding kinetics of RNA using optical tweezers. I. Effects of experimental variables on measured results

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Differential detection of dual traps improves the spatial resolution of optical tweezers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Forced-unfolding and force-quench refolding of RNA hairpins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Probing the mechanical folding kinetics of TAR RNA by hopping, force-jump, and force-ramp methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Direct observation of the three-state folding of a single protein molecule

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Thermodynamic and kinetic aspects of RNA pulling experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

DNA base pair resolution by single molecule force spectroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Atomic force microscopy imaging and pulling of nucleic acids

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Slow nucleic acid unzipping kinetics from sequence-defined barriers

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Mfold web server for nucleic acid folding and hybridization prediction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

The effect of force on thermodynamics and kinetics of single molecule reactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Force-induced denaturation of RNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Mechanical stability of single DNA molecules

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Myosin-V is a processive actin-based motor

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Mechanical and chemical unfolding of a single protein: a comparison

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Mechanical separation of the complementary strands of DNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Dynamic strength of molecular adhesion bonds

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Entropic elasticity of lambda-phage DNA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Characterization of base-pair opening in deoxynucleotide duplexes using catalyzed exchange of the imino proton

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Models for the Specific Adhesion of Cells to Cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Passive all-optical force clamp for high-resolution laser trapping.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Force-clamp spectroscopy monitors the folding trajectory of a single protein

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Reversible unfolding of single RNA molecules by mechanical force

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852354

Force-dependent fragility in RNA hairpins

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17293409

12 December 2020

inferred from PubMed ID database lookup

Reversible unfolding of individual titin immunoglobulin domains by AFM

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17293409

12 December 2020

inferred from PubMed ID database lookup

Studies of base pair kinetics by NMR measurement of proton exchange

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17293409

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1529/BIOPHYSJ.106.094243

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17293409%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

1 reference

1 reference

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25 December 2019

PubMed publication ID

17293409

1 reference