Inferring nonneutral evolution from contrasting patterns of polymorphisms and divergences in different protein coding regions of enterovirus 71 circulating in Taiwan during 1998-2003. (Q30497073)

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English	Inferring nonneutral evolution from contrasting patterns of polymorphisms and divergences in different protein coding regions of enterovirus 71 circulating in Taiwan during 1998-2003.	scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

Inferring nonneutral evolution from contrasting patterns of polymorphisms and divergences in different protein coding regions of enterovirus 71 circulating in Taiwan during 1998-2003. (English)

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

protein evolution

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4

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Europe PubMed Central

PMC publication ID

18 October 2017

8

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

object named as

Guang-Wu Chen

6

0 references

object named as

Hurng-Yi Wang

1

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7

object named as

Shin-Ru Shih

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

author name string

Kao-Chien Tsao

2

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

Chia-Hung Hsieh

3

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

Tzou-Yien Lin

5

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

publication date

25 September 2010

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

BMC Evolutionary Biology

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Europe PubMed Central

PMC publication ID

18 October 2017

10

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Europe PubMed Central

PMC publication ID

18 October 2017

294

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

Evolutionary genetics of human enterovirus 71: origin, population dynamics, natural selection, and seasonal periodicity of the VP1 gene

1 reference

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20 June 2018

Far upstream element binding protein 2 interacts with enterovirus 71 internal ribosomal entry site and negatively regulates viral translation

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Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence

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The genomic and epidemiological dynamics of human influenza A virus

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2958165

20 June 2018

Rates of evolutionary change in viruses: patterns and determinants

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20 June 2018

BEAST: Bayesian evolutionary analysis by sampling trees

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20 June 2018

Genetic evolution of enterovirus 71: epidemiological and pathological implications

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PAML 4: phylogenetic analysis by maximum likelihood

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20 June 2018

Phylogenetic evidence for inter-typic recombination in the emergence of human enterovirus 71 subgenotypes

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20 June 2018

Relaxed phylogenetics and dating with confidence

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20 June 2018

Molecular epidemiology of enterovirus 71 over two decades in an Australian urban community.

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20 June 2018

Frequency and dynamics of recombination within different species of human enteroviruses

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20 June 2018

Frequent importation of enterovirus 71 from surrounding countries into the local community of Yamagata, Japan, between 1998 and 2003.

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Enteroviruses as agents of emerging infectious diseases.

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20 June 2018

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

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Datamonkey: rapid detection of selective pressure on individual sites of codon alignments

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Bayesian coalescent inference of past population dynamics from molecular sequences

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Bayes empirical bayes inference of amino acid sites under positive selection

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Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests

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Regulation of picornavirus gene expression

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Libsequence: a C++ class library for evolutionary genetic analysis.

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Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites.

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20 June 2018

Molecular Epidemiology of Human Enterovirus 71 Strains and Recent Outbreaks in the Asia-Pacific Region: Comparative Analysis of the VP1 and VP4 Genes

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20 June 2018

Enterovirus 71 outbreaks, Taiwan: occurrence and recognition

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20 June 2018

Changing effective population size and the McDonald-Kreitman test

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Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data

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Consequences of recombination on traditional phylogenetic analysis.

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Evolution of circulating wild poliovirus and of vaccine-derived poliovirus in an immunodeficient patient: a unifying model

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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New methods for estimating the numbers of synonymous and nonsynonymous substitutions

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Virological diagnosis of enterovirus type 71 infections: Experiences gained during an epidemic of acute CNS diseases in Hungary in 1978

1 reference

https://pubmed.ncbi.nlm.nih.gov/20868512

12 December 2020

based on heuristic

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Detecting recombination from gene trees

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https://pubmed.ncbi.nlm.nih.gov/20868512

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2148-10-294

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Europe PubMed Central

PMC publication ID

18 October 2017

Dimensions Publication ID

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2148-10-294

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 October 2017

ResearchGate publication ID

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