DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas) (Q30497576)

28 September 2017

DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas) (English)

1 reference

Crossref

DOI

10.1186/1471-2164-11-483

https://api.crossref.org/works/10.1186/1471-2164-11-483

2 July 2024

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0 references

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2 July 2024

2

Steven B. Roberts

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

2 July 2024

author name string

Mackenzie R. Gavery

series ordinal

1

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2 July 2024

language of work or name

English

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publication date

27 August 2010

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full work available at URL

28 September 2017

https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-11-483

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

http://www.biomedcentral.com/content/pdf/1471-2164-11-483.pdf

2 July 2024

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

http://www.biomedcentral.com/1471-2164/11/483

2 July 2024

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http://www.biomedcentral.com/1471-2164/11/483/abstract

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20799955/pdf/?tool=EBI

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20799955/?tool=EBI

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

https://europepmc.org/articles/PMC2996979

2 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20799955

https://europepmc.org/articles/PMC2996979?pdf=render

2 July 2024

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1 reference

28 September 2017

11

1 reference

28 September 2017

483

1 reference

Intergenic, gene terminal, and intragenic CpG islands in the human genome

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes

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1 reference

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Solving the Dnmt2 enigma.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase

20 June 2018

1 reference

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DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera

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1 reference

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Epigenetic regulation of stress responses in plants

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Analysis of genes isolated from plated hemocytes of the Pacific oyster, Crassostreas gigas

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Evolutionary developmental biology and genomics

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1 reference

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Genomic patterns of DNA methylation: targets and function of an epigenetic mark

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

CpG methylation is targeted to transcription units in an invertebrate genome

20 June 2018

1 reference

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Environmental epigenomics and disease susceptibility

20 June 2018

1 reference

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The epigenomics of cancer

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1 reference

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Germ-line epigenetic modification of the murine A vy allele by nutritional supplementation

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Functional CpG methylation system in a social insect

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1 reference

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Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Epigenetic transgenerational actions of endocrine disruptors and male fertility

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1 reference

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Epigenetics and the Environment

20 June 2018

1 reference

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The Changing Concept of Epigenetics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

MethPrimer: designing primers for methylation PCRs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Synergism of Xist RNA, DNA methylation, and histone hypoacetylation in maintaining X chromosome inactivation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

DNA of Drosophila melanogaster contains 5-methylcytosine

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Sequence analysis of transposable elements in the sea squirt, Ciona intestinalis.

20 June 2018

1 reference

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Drosophila proteins related to vertebrate DNA (5-cytosine) methyltransferases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Eukaryotic DNA methylation as an evolutionary device

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Suppression of crossing-over by DNA methylation in Ascobolus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

How does DNA methylation repress transcription?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Methylation of genomes and genes at the invertebrate-vertebrate boundary

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Gene number, noise reduction and biological complexity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Hypomethylation of hepatic nuclear DNA in rats fed with a carcinogenic methyl-deficient diet

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Variable patterns of total DNA and rDNA methylation in animals.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Caenorhabditis elegans DNA does not contain 5-methylcytosine at any time during development or aging

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Basic local alignment search tool

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Analysis of CpG suppression in methylated and nonmethylated species

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Repression of genes by DNA methylation depends on CpG density and promoter strength: evidence for involvement of a methyl-CpG binding protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Molecular basis of base substitution hotspots in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Direct and transgenerational impact on Daphnia magna of chemicals with a known effect on DNA methylation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

A GC-rich satellite DNA and karyology of the bivalve mollusk Donax trunculus: a dominance of GC-rich heterochromatin

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Occurrence of DNA methylation in Daphnia magna and influence of multigeneration Cd exposure

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Transgene-induced silencing of Arabidopsis phytochrome A gene via exonic methylation

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Epigenetic transgenerational actions of endocrine disruptors.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Phenotypic Plasticity of HSP70 and HSP70 Gene Expression in the Pacific Oyster (Crassostrea gigas): Implications for Thermal Limits and Induction of Thermal Tolerance

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

DNA methylation in Drosophila melanogaster.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

CpG distribution patterns in methylated and non-methylated species

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

Dependence of transcriptional repression on CpG methylation density

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996979

DNA methylation and structural and functional bimodality of vertebrate promoters

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1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20799955

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Methylated and unmethylated DNA compartments in the sea urchin genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20799955

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20799955

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-11-483

1 reference

Dimensions Publication ID

28 September 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-483

1 reference

28 September 2017

1 reference