The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion (Q30498310)

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21 January 2020

title

The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion (English)

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1

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21 January 2020

author name string

D M McQueen

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21300894%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Charles S Peskin

series ordinal

3

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21 January 2020

language of work or name

English

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publication date

7 February 2011

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Proceedings of the National Academy of Sciences of the United States of America

21 January 2020

published in

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volume

108

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issue

9

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page(s)

3815-3820

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Reaction-diffusion master equation, diffusion-limited reactions, and singular potentials

21 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

An end to 40 years of mistakes in DNA-protein association kinetics?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Subdiffraction multicolor imaging of the nuclear periphery with 3D structured illumination microscopy

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Spontaneous access to DNA target sites in folded chromatin fibers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Probing transcription factor dynamics at the single-molecule level in a living cell

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Analysis of binding at a single spatially localized cluster of binding sites by fluorescence recovery after photobleaching.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Mechanism of mRNA transport in the nucleus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Rapid spontaneous accessibility of nucleosomal DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3048119

Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1018821108

Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1018821108

A Robust Numerical Algorithm for Studying Biomolecular Transport Processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1018821108

Exact stochastic simulation of coupled chemical reactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1018821108

21 January 2018

Identifiers

DOI

10.1073/PNAS.1018821108

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21 January 2020

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21 January 2020

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