Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis (Q30502112)

19 October 2017

Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis (English)

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19 October 2017

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8

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19 October 2017

Mikael Johansson

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Peter D Gould

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Peter Gould

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Anthony J Hall

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Anthony Hall

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Neil Hall

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Neil Hall

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author name string

Kevin Ashelford

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19 October 2017

Maria E Eriksson

2

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19 October 2017

Christopher M Allen

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19 October 2017

Rosalinda D'Amore

4

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19 October 2017

Suzanne Kay

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19 October 2017

23 March 2011

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19 October 2017

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19 October 2017

12

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19 October 2017

3

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19 October 2017

R28

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Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing

19 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Lights, rhythms, infection: the role of light and the circadian clock in determining the outcome of plant-pathogen interactions.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

The AtNFXL1 gene functions as a signaling component of the type A trichothecene-dependent response

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Sequencing of natural strains of Arabidopsis thaliana with short reads

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Caenorhabditis elegans mutant allele identification by whole-genome sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Network discovery pipeline elucidates conserved time-of-day-specific cis-regulatory modules

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots".

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Spectrum of chemically induced mutations from a large-scale reverse-genetic screen in Arabidopsis.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Orchestrated transcription of key pathways in Arabidopsis by the circadian clock

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Naturally occurring variation in Arabidopsis: an underexploited resource for plant genetics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

A novel cysteine-rich sequence-specific DNA-binding protein interacts with the conserved X-box motif of the human major histocompatibility complex class II genes via a repeated Cys-His domain and functions as a transcriptional repressor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Circadian clock mutants in Arabidopsis identified by luciferase imaging

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

Differential DNA repair in transcriptionally active and inactive proto-oncogenes: c-abl and c-mos

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

A novel circadian phenotype based on firefly luciferase expression in transgenic plants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks.

14 July 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Rapid whole-genome mutational profiling using next-generation sequencing technologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

SHOREmap: simultaneous mapping and mutation identification by deep sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Forward genetic analysis of the circadian clock separates the multiple functions of ZEITLUPE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

The DIURNAL project: DIURNAL and circadian expression profiling, model-based pattern matching, and promoter analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Core genome responses involved in acclimation to high temperature

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Involvement of GIGANTEA gene in the regulation of the cold stress response in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Web-based primer design for single nucleotide polymorphism analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Overlapping and Distinct Roles of PRR7 and PRR9 in the Arabidopsis Circadian Clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Luciferases as reporter genes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3129678

The molecular basis of temperature compensation in the Arabidopsis circadian clock

26 November 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-3-R28

Analysis of Circadian Leaf Movement Rhythms in Arabidopsis thaliana

21 January 2018

1 reference

12 December 2020

The AtNFXL1 gene encodes a NF-X1 type zinc finger protein required for growth under salt stress

1 reference

12 December 2020

dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: experimental applications in Arabidopsis thaliana genetics

1 reference

12 December 2020

Covariation of synaptonemal complex length and mammalian meiotic exchange rates

1 reference

12 December 2020

Identifiers

DOI

10.1186/GB-2011-12-3-R28

1 reference

19 October 2017

1 reference

19 October 2017

PubMed publication ID

21429190

1 reference