Protein compressibility, dynamics, and pressure (Q30503656)

18 September 2017

1 reference

title

Protein compressibility, dynamics, and pressure (English)

1 reference

18 September 2017

Kharakoz DP

1

1 reference

PMCID

1300955

18 September 2017

language of work or name

English

0 references

publication date

1 July 2000

1 reference

18 September 2017

1 reference

18 September 2017

79

1 reference

18 September 2017

1

1 reference

18 September 2017

511-525

1 reference

High pressure NMR study of a small protein, gurmarin

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Local stability and dynamics of apocytochrome b562 examined by the dependence of hydrogen exchange on hydrostatic pressure.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Thermodynamic volume cycles for electron transfer in the cytochrome c oxidase and for the binding of cytochrome c to cytochrome c oxidase

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Pressure dependence of amide hydrogen-deuterium exchange rates for individual sites in T4 lysozyme

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Effect of pressure on individual hydrogen bonds in proteins. Basic pancreatic trypsin inhibitor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Mechanical property of a TIM-barrel protein

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrogen exchange: the modern legacy of Linderstrøm-Lang

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Intrinsic compressibility and volume compression in solvated proteins by molecular dynamics simulation at high pressure

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

The hydration of globular proteins as derived from volume and compressibility measurements: cross correlating thermodynamic and structural data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Intramolecular cavities in globular proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Mechanical deformation enhances catalytic activity of crystalline carboxypeptidase A.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrogen isotope exchange kinetics of single protons in bovine pancreatic trypsin inhibitor

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrogen exchange and the dynamic structure of proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Adiabatic compressibility of globular proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Dynamic structure of globular proteins: conformational rigidity and fluctuational motility

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Increase in apparent compressibility of cytochrome c upon oxidation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrogen exchange and structural dynamics of proteins and nucleic acids

14 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

14 July 2018

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

7 January 2021

inferred from DOI database lookup

Effects of ligand binding on the rates of hydrogen exchange in myoglobin and hemoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Internal cavities and buried waters in globular proteins.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Structural basis of hierarchical multiple substates of a protein. V: Nonlocal deformations.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrophobic packing in T4 lysozyme probed by cavity-filling mutants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Theory of cooperative transitions in protein molecules. I. Why denaturation of globular protein is a first-order phase transition

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Structural and thermodynamic analysis of the packing of two alpha-helices in bacteriophage T4 lysozyme

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Ultrasonic velocimetry of biological compounds

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

The effect of high pressure of protein dynamics from Rayleigh scattering of Mossbauer irradiation data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Differences in hydrogen exchange behavior between the oxidized and reduced forms of Escherichia coli thioredoxin

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Reduction of thioredoxin significantly decreases its partial specific volume and adiabatic compressibility

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Thermodynamic fluctuations in protein molecules

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Pressure effects on folded proteins in solution. Hydrogen exchange at elevated pressures

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Areas, volumes, packing and protein structure

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Overall and localized fluctuation in the structure of a protein molecule

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Nuclear magnetic resonance studies of slowly exchanging peptide protons in cytochrome c in aqueous solution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Mechanical denaturation of globular protein in the solid state.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Compressibility of lysozyme protein crystals by X-ray diffraction.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Reduction of protein volume and compressibility by macromolecular cosolvents: dependence on the cosolvent molecular weight

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Electrostatics of proteins: description in terms of two dielectric constants simultaneously.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Properties of the protein matrix revealed by the free energy of cavity formation

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Hydrational and intrinsic compressibilities of globular proteins.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Penetration of dioxygen into proteins studied by quenching of phosphorescence and fluorescence

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300955

Pressure-induced changes in the folded structure of lysozyme

26 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

van der Waals Volumes and Radii

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

The native and the heat-induced denatured states of alpha-chymotrypsinogen A: thermodynamic and spectroscopic studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Contribution of hydrophobic interactions to protein stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Partial volumes and compressibilities of extended polypeptide chains in aqueous solution: additivity scheme and implication of protein unfolding at normal and high pressure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Molten globule of human alpha-lactalbumin: hydration, density, and compressibility of the interior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

On the nature of the protein interior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

A nontraditional role for water in the cytochrome c oxidase reaction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Looking into the energy landscape of myoglobin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Adiabatic compressibility of myoglobin. Effect of axial ligand and denaturation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Thermal motion of whole protein molecules in protein solids

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Elasticity of globular proteins. The relation between mechanics, thermodynamics and mobility

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Glycerol decreases the volume and compressibility of protein interior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Hydrogen-deuterium exchange of cytochrome c. I. Effect of oxidation state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

Conformational deformation in deoxymyoglobin by hydrostatic pressure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976313-2

The mechanism of action of pressure on intramolecular protein dynamics

7 January 2021

1 reference

12 December 2020

[Calculation of the surface and volume of proteins in solution]

1 reference

12 December 2020

[Ultrasound velocimetry of lysozyme solutions]

1 reference

12 December 2020

[Changes in the contractibility of the cytochrome c globule during redox transition]

1 reference

12 December 2020

[Mechanism of the stabilizing effect of glucose on lysozyme in the crystalline state]

1 reference

12 December 2020

[Accessibility of porphyrin macrocycle in myoglobin at various pH levels. Fluorescence study of the porphyrin-globin complex]

1 reference

12 December 2020

10.1016/S0006-3495(00)76313-2

Identifiers

DOI

1 reference

release_c65ytbw4ojdttgjt4aw3xulexm

18 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/c65ytbw4ojdttgjt4aw3xulexm

24 November 2022

mapped directly with Wikidata item

PMCID

1300955

1 reference

18 September 2017

1 reference

PMCID

1300955