FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context. (Q30503882)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

1 reference

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Ronald Simon

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Sascha Steinbiss

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

author name string

Stefan Kurtz

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

publication date

28 July 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

Journal of clinical bioinformatics

12 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

volume

1

1 reference

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12 February 2020

issue

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

page(s)

20

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

12 February 2020

limma

object named as

R package limma

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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A flexible rank-based framework for detecting copy number aberrations from array data

20 June 2018

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AnnotationSketch: a genome annotation drawing library

20 June 2018

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SIGMA2: a system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes

20 June 2018

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An integrative genomic approach reveals coordinated expression of intronic miR-335, miR-342, and miR-561 with deregulated host genes in multiple myeloma

20 June 2018

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A fast and flexible method for the segmentation of aCGH data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data

20 June 2018

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ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.

20 June 2018

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20 June 2018

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Visualization of genomic aberrations using Affymetrix SNP arrays

20 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

TM4 microarray software suite

20 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

CAPweb: a bioinformatics CGH array Analysis Platform

20 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles

20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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CGHAnalyzer: a stand-alone software package for cancer genome analysis using array-based DNA copy number data

20 June 2018

1 reference

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CGHPRO -- a comprehensive data analysis tool for array CGH.

20 June 2018

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Denoising array-based comparative genomic hybridization data using wavelets

20 June 2018

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20 June 2018

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20 June 2018

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CGH-Explorer: a program for analysis of array-CGH data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Caryoscope: an Open Source Java application for viewing microarray data in a genomic context

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Circular binary segmentation for the analysis of array-based DNA copy number data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Analysis of array CGH data: from signal ratio to gain and loss of DNA regions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Accurate detection of aneuploidies in array CGH and gene expression microarray data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

The Ensembl Web site: mechanics of a genome browser

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

A census of human cancer genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Normalization of cDNA microarray data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Microarray data normalization and transformation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

The generic genome browser: a building block for a model organism system database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

The human genome browser at UCSC

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Gains, losses, and amplifications of genomic materials in primary gastric cancers analyzed by comparative genomic hybridization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

Frequent inactivation of PTEN/MMAC1 in primary prostate cancer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3164613

26 November 2018

Identifiers

DOI

10.1186/2043-9113-1-20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

journals/jclinbioinf/MaderSSK11

12 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1003869340

0 references

Fatcat ID

release_vjmj5wf6gba2vap3vpmce567t4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/vjmj5wf6gba2vap3vpmce567t4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21884636%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

PubMed publication ID

21884636

1 reference