CHANCE: comprehensive software for quality control and validation of ChIP-seq data (Q30573512)

21 September 2017

CHANCE: comprehensive software for quality control and validation of ChIP-seq data (English)

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21 September 2017

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Jun S Song

3

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Abhinav Nellore

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2

object named as

Abhinav Nellore

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21 September 2017

Aaron Diaz

1

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21 September 2017

language of work or name

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15 October 2012

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21 September 2017

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21 September 2017

13

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21 September 2017

10

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21 September 2017

R98

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Normalization, bias correction, and peak calling for ChIP-seq

21 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

ConDeTri--a content dependent read trimmer for Illumina data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

Systematic bias in high-throughput sequencing data and its correction by BEADS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

SAMStat: monitoring biases in next generation sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

A signal-noise model for significance analysis of ChIP-seq with negative control

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

Galaxy: a platform for interactive large-scale genome analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4053734

htSeqTools: high-throughput sequencing quality control, processing and visualization in R.

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2012-13-10-R98

10.1186/GB-2012-13-10-R98

21 January 2018

Identifiers

DOI

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Dimensions Publication ID

21 September 2017

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21 September 2017

PubMed publication ID

23068444

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