Hexicon 2: automated processing of hydrogen-deuterium exchange mass spectrometry data with improved deuteration distribution estimation (Q30577887)

12 September 2017

Hexicon 2: automated processing of hydrogen-deuterium exchange mass spectrometry data with improved deuteration distribution estimation (English)

1 reference

12 September 2017

1 reference

6

Andreas Winkler

1 reference

12 September 2017

Robert Lindner

1

1 reference

12 September 2017

Xinghua Lou

2

1 reference

12 September 2017

Jochen Reinstein

3

1 reference

12 September 2017

Robert L Shoeman

4

1 reference

12 September 2017

Fred A Hamprecht

5

1 reference

12 September 2017

28 March 2014

1 reference

Journal of the American Society for Mass Spectrometry

12 September 2017

1 reference

12 September 2017

25

1 reference

12 September 2017

6

1 reference

12 September 2017

1018-1028

1 reference

Creative Commons Attribution 4.0 International

12 September 2017

start time

28 March 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Characterization of elements involved in allosteric light regulation of phosphodiesterase activity by comparison of different functional BlrP1 states

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Analysis of overlapped and noisy hydrogen/deuterium exchange mass spectra

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

A ternary AppA–PpsR–DNA complex mediates light regulation of photosynthesis-related gene expression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

H/D exchange centroid monitoring is insufficient to show differences in the behavior of protein states

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Platform dependencies in bottom-up hydrogen/deuterium exchange mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

HDX workbench: software for the analysis of H/D exchange MS data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

HDXFinder: automated analysis and data reporting of deuterium/hydrogen exchange mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

ExMS: data analysis for HX-MS experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

libfbi: a C++ implementation for fast box intersection and application to sparse mass spectrometry data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Deuteration distribution estimation with improved sequence coverage for HX/MS experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Hydrogen exchange mass spectrometry: what is it and what can it tell us?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Automated data reduction for hydrogen/deuterium exchange experiments, enabled by high-resolution Fourier transform ion cyclotron resonance mass spectrometry.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Analysis of protein conformation and dynamics by hydrogen/deuterium exchange MS.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Hydra: software for tailored processing of H/D exchange data from MS or tandem MS analyses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

HD desktop: an integrated platform for the analysis and visualization of H/D exchange data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

NITPICK: peak identification for mass spectrometry data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Extraction of local hydrogen exchange data from HDX CAD MS measurements by deconvolution of isotopic distributions of fragment ions.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Semi-automated data processing of hydrogen exchange mass spectra using HX-Express

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Identification and characterization of EX1 kinetics in H/D exchange mass spectrometry by peak width analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Automated extraction of backbone deuteration levels from amide H/2H mass spectrometry experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Quantitating the statistical distribution of deuterium incorporation to extend the utility of H/D exchange MS data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Hydrogen exchange methods to study protein folding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Molecular genetic analysis suggesting interactions between AppA and PpsR in regulation of photosynthesis gene expression in Rhodobacter sphaeroides 2.4.1.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018513

Automatic analysis of hydrogen/deuterium exchange mass spectra of peptides and proteins using calculations of isotopic distributions.

20 June 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-014-0850-Y

Feature based retention time alignment for improved HDX MS analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-014-0850-Y

Estimating the Dimension of a Model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-014-0850-Y

Specificity of immobilized porcine pepsin in H/D exchange compatible conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS13361-014-0850-Y

21 January 2018

Least angle regression

1 reference

https://api.crossref.org/works/10.1007%2FS13361-014-0850-Y

Determination of monoisotopic masses and ion populations for large biomolecules from resolved isotopic distributions

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24676893

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S13361-014-0850-Y

1 reference

Dimensions Publication ID

12 September 2017

0 references

1 reference

12 September 2017

PubMed publication ID

24676893

1 reference