Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties (Q30590335)

15 August 2017

Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties (English)

1 reference

15 August 2017

1 reference

Christine Nardini

4

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author name string

Yuanhua Liu

series ordinal

1

1 reference

15 August 2017

Valentina Devescovi

series ordinal

2

1 reference

15 August 2017

Suning Chen

series ordinal

3

1 reference

15 August 2017

language of work or name

1 reference

19 February 2013

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15 August 2017

1 reference

15 August 2017

7

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15 August 2017

14

1 reference

https://scigraph.springernature.com/pub.10.1186/1752-0509-7-14

15 August 2017

0 references

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20 June 2018

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High-risk ovarian cancer based on 126-gene expression signature is uniquely characterized by downregulation of antigen presentation pathway.

20 June 2018

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Deciphering causal and statistical relations of molecular aberrations and gene expressions in NCI-60 cell lines

20 June 2018

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HOX genes in ovarian cancer

20 June 2018

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A novel oncogenic role for the miRNA-506-514 cluster in initiating melanocyte transformation and promoting melanoma growth

20 June 2018

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Integrated genomic analyses of ovarian carcinoma

20 June 2018

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Downregulation of microRNA-211 is involved in expression of preferentially expressed antigen of melanoma in melanoma cells

20 June 2018

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The prognostic influence of tumour-infiltrating lymphocytes in cancer: a systematic review with meta-analysis

20 June 2018

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In melanoma, beta-catenin is a suppressor of invasion.

20 June 2018

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Joint analysis of transcriptional and post- transcriptional brain tumor data: searching for emergent properties of cellular systems

20 June 2018

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20 June 2018

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Global microRNA analysis of the NCI-60 cancer cell panel

20 June 2018

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The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

20 June 2018

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A re-evaluation of the "oncogenic" nature of Wnt/beta-catenin signaling in melanoma and other cancers

20 June 2018

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Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM.

20 June 2018

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mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities

20 June 2018

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Purification and N-glycosylation analysis of melanoma antigen dopachrome tautomerase

20 June 2018

1 reference

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Three dysregulated miRNAs control kallikrein 10 expression and cell proliferation in ovarian cancer

20 June 2018

1 reference

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Roles of endothelin signaling in melanocyte development and melanoma

20 June 2018

1 reference

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Genomic profiling of messenger RNAs and microRNAs reveals potential mechanisms of TWEAK-induced skeletal muscle wasting in mice

20 June 2018

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MicroRNAs in ovarian cancer biology and therapy resistance.

20 June 2018

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The Müllerian HOXA10 gene promotes growth of ovarian surface epithelial cells by stimulating epithelial-stromal interactions

20 June 2018

1 reference

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Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis

20 June 2018

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A Wnt survival guide: from flies to human disease.

20 June 2018

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

20 June 2018

1 reference

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RUNX3 protein is overexpressed in human epithelial ovarian cancer

20 June 2018

1 reference

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HLA class I antigen processing machinery component expression and intratumoral T-Cell infiltrate as independent prognostic markers in ovarian carcinoma

20 June 2018

1 reference

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Functional aspects of animal microRNAs

20 June 2018

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Detection of a microRNA signal in an in vivo expression set of mRNAs

20 June 2018

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mRNA/microRNA gene expression profile in microsatellite unstable colorectal cancer

20 June 2018

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MicroRNA targeting specificity in mammals: determinants beyond seed pairing

20 June 2018

1 reference

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MicroRNA expression profiles for the NCI-60 cancer cell panel

20 June 2018

1 reference

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Reactome: a knowledge base of biologic pathways and processes

20 June 2018

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Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study.

20 June 2018

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Interferons, immunity and cancer immunoediting

20 June 2018

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microRNAs exhibit high frequency genomic alterations in human cancer

20 June 2018

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The clinical applications of a systems approach

20 June 2018

1 reference

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The limits of reductionism in medicine: could systems biology offer an alternative?

20 June 2018

1 reference

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Developmental patterning in the wrong context: the paradox of epithelial ovarian cancers

20 June 2018

1 reference

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Where are we in genomics?

20 June 2018

1 reference

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The KEGG resource for deciphering the genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

PANTHER: a library of protein families and subfamilies indexed by function

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Natural selection of tumor variants in the generation of "tumor escape" phenotypes

20 June 2018

1 reference

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Systems biology: a brief overview

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Finding genes in the C2C12 osteogenic pathway by k-nearest-neighbor classification of expression data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Significance analysis of microarrays applied to the ionizing radiation response

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Support vector machine classification and validation of cancer tissue samples using microarray expression data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Gene ontology: tool for the unification of biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Direct regulation of nacre, a zebrafish MITF homolog required for pigment cell formation, by the Wnt pathway.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

20 June 2018

The Hallmarks of Cancer

1 reference

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Expression of major histocompatibility complex class I antigens as a strategy for the potentiation of immune recognition of tumor cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Microarray analysis of gliomas reveals chromosomal position-associated gene expression patterns and identifies potential immunotherapy targets.

20 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-14

Melanoma cell invasiveness is regulated by miR-211 suppression of the BRN2 transcription factor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-14

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-14

MicroRNA expression profiles in serous ovarian carcinoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-14

The detection of differentially expressed microRNAs from the serum of ovarian cancer patients using a novel real-time PCR platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-14

Expression of TGFß1 and its receptors is associated with biological features of ovarian cancer and sensitivity to paclitaxel/carboplatin.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3610285

Defining the conditions for the generation of melanocytes from human embryonic stem cells

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23418673

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-7-14

1 reference

15 August 2017

journals/bmcsb/LiuDCN13

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

15 August 2017

PubMed publication ID

23418673

1 reference