A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data (Q30655764)

1 November 2017

A transmission/disequilibrium test that allows for genotyping errors in the analysis of single-nucleotide polymorphism data (English)

1 reference

single-nucleotide polymorphism

1 November 2017

1 reference

D Gordon

1

1 reference

1 November 2017

S C Heath

series ordinal

2

1 reference

1 November 2017

X Liu

series ordinal

3

1 reference

1 November 2017

J Ott

series ordinal

4

1 reference

1 November 2017

language of work or name

English

0 references

publication date

5 July 2001

1 reference

American Journal of Human Genetics

1 November 2017

1 reference

1 November 2017

69

1 reference

1 November 2017

2

1 reference

1 November 2017

371-380

1 reference

The Interaction of Selection and Linkage. I. General Considerations; Heterotic Models

1 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Fine mapping of a gene responsible for regulating dietary cholesterol absorption; founder effects underlie cases of phytosterolaemia in multiple communities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

The effect that genotyping errors have on the robustness of common linkage-disequilibrium measures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

The future of genetic case-control studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Identification and analysis of error types in high-throughput genotyping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Unbiased application of the transmission/disequilibrium test to multilocus haplotypes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

A multipoint method for detecting genotyping errors and mutations in sibling-pair linkage data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Linkage analysis in the presence of errors III: marker loci and their map as nuisance parameters

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Linkage analysis in the presence of errors IV: joint pseudomarker analysis of linkage and/or linkage disequilibrium on a mixture of pedigrees and singletons when the mode of inheritance cannot be accurately specified

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Linkage analysis in the presence of errors II: marker-locus genotyping errors modeled with hypercomplex recombination fractions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Linkage analysis in the presence of errors I: complex-valued recombination fractions and complex phenotypes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Power loss for multiallelic transmission/disequilibrium test when errors introduced: GAW11 simulated data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

20 June 2018

Cleaning genotype data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

An optimal algorithm for automatic genotype elimination

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

True pedigree errors more frequent than apparent errors for single nucleotide polymorphisms.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

A DNA polymorphism discovery resource for research on human genetic variation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

PedCheck: a program for identification of genotype incompatibilities in linkage analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

A sibship test for linkage in the presence of association: the sib transmission/disequilibrium test

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

General score tests for associations of genetic markers with disease using cases and their parents.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Identifying marker typing incompatibilities in linkage analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

The future of genetic studies of complex human diseases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Error detection for genetic data, using likelihood methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Molecular and statistical approaches to the detection and correction of errors in genotype databases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Computer-simulation methods in human linkage analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Influence of aberrant observations on high-resolution linkage analysis outcomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Error filtration, interference, and the human linkage map

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

A haplotype-based 'haplotype relative risk' approach to detecting allelic associations.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Systematic detection of errors in genetic linkage data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Linkage analysis with misclassification at one locus.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Experimental design and error detection for polyploid radiation hybrid mapping.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1235309

Detecting marker inconsistencies in human gene mapping

25 November 2018

1 reference

12 December 2020

Genome scanning for complex disease genes using the transmission/disequilibrium test and haplotype-based haplotype relative risk

1 reference

12 December 2020

Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis

1 reference

12 December 2020

Methods for precise sizing, automated binning of alleles, and reduction of error rates in large-scale genotyping using fluorescently labeled dinucleotide markers. FUSION (Finland-U.S. Investigation of NIDDM Genetics) Study Group

1 reference

12 December 2020

The haplotype linkage disequilibrium test for genome-wide screens: its power and study design

1 reference

12 December 2020

Determination of SNP allele frequencies in pooled DNAs by primer extension genotyping and denaturing high-performance liquid chromatography

1 reference

12 December 2020

The power of linkage detection by the transmission/disequilibrium tests

1 reference

12 December 2020

Population genetics--making sense out of sequence

1 reference

12 December 2020

The effects of genotyping errors and interference on estimation of genetic distance

1 reference

12 December 2020

Identifiers

DOI

10.1086/321981

1 reference

1 November 2017

1 reference

1 November 2017

PubMed publication ID

11443542

1 reference