Efficient imputation of missing markers in low-coverage genotyping-by-sequencing data from multiparental crosses. (Q30768020)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24583583%20AND%20SRC:MED&resulttype=core&format=json

9 March 2020

title

Efficient imputation of missing markers in low-coverage genotyping-by-sequencing data from multiparental crosses (English)

1 reference

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9 March 2020

1 reference

1

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9 March 2020

Ramil Mauleon

3

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9 March 2020

Karl Broman

4

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9 March 2020

author name string

Chitra Raghavan

2

1 reference

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9 March 2020

Hei Leung

5

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9 March 2020

language of work or name

English

0 references

publication date

28 February 2014

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9 March 2020

number of pages

4

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based on heuristic

inferred from page(s)

published in

Genetics

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9 March 2020

volume

197

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9 March 2020

issue

1

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9 March 2020

page(s)

401-404

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Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding

9 March 2020

cites work

1 reference

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Imputation of unordered markers and the impact on genomic selection accuracy

20 June 2018

1 reference

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Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation

20 June 2018

1 reference

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A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

20 June 2018

1 reference

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Discovery of genome-wide DNA polymorphisms in a landrace cultivar of Japonica rice by whole-genome sequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

Genetic properties of the maize nested association mapping population

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

A Multiparent Advanced Generation Inter-Cross to fine-map quantitative traits in Arabidopsis thaliana.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

From mutations to MAGIC: resources for gene discovery, validation and delivery in crop plants.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

The International HapMap Project

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

R/qtl: QTL mapping in experimental crosses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

A method for fine mapping quantitative trait loci in outbred animal stocks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

Imputing missing genotypes with weighted k nearest neighbors

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

R/mpMap: a computational platform for the genetic analysis of multiparent recombinant inbred lines.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

Testing association of statistically inferred haplotypes with discrete and continuous traits in samples of unrelated individuals.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4012496

10.1534/GENETICS.113.158014

25 November 2018

Identifiers

DOI

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release_2xzdgc5njndj7g3uzent3mimle

9 March 2020

Fatcat ID

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mapped directly with Wikidata item

24 November 2022

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9 March 2020

PubMed publication ID

24583583

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24583583%20AND%20SRC:MED&resulttype=core&format=json