Budding yeast chromatin is dispersed in a crowded nucleoplasm in vivo. (Q30832476)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

title

Budding yeast chromatin is dispersed in a crowded nucleoplasm in vivo (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

2

1 reference

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22 March 2020

Uttam Surana

6

1 reference

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22 March 2020

Lu Gan

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

author name string

Chen Chen

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Jian Shi

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Sachiko Tamura

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Kazuhiro Maeshima

5

1 reference

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22 March 2020

publication date

7 September 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

Molecular Biology of the Cell

22 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

volume

27

1 reference

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22 March 2020

issue

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

page(s)

3357-3368

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

22 March 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5170867/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Nucleosomal arrays self-assemble into supramolecular globular structures lacking 30-nm fibers.

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EMPIAR: a public archive for raw electron microscopy image data.

21 June 2018

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Visualizing the molecular sociology at the HeLa cell nuclear periphery

21 June 2018

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Hierarchical looping of zigzag nucleosome chains in metaphase chromosomes

21 June 2018

1 reference

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Super-resolution imaging reveals distinct chromatin folding for different epigenetic states

21 June 2018

1 reference

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Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C

21 June 2018

1 reference

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A simple biophysical model emulates budding yeast chromosome condensation

21 June 2018

1 reference

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Developments in cryo-electron tomography for in situ structural analysis.

21 June 2018

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Three-dimensional genome architecture: players and mechanisms

21 June 2018

1 reference

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Chromatin structure revealed by X-ray scattering analysis and computational modeling

21 June 2018

1 reference

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Cryo-EM study of the chromatin fiber reveals a double helix twisted by tetranucleosomal units

21 June 2018

1 reference

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Chromatin as dynamic 10-nm fibers

21 June 2018

1 reference

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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 June 2018

1 reference

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H1 histones: current perspectives and challenges

21 June 2018

1 reference

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Chromatin in a marine picoeukaryote is a disordered assemblage of nucleosomes

21 June 2018

1 reference

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Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data

21 June 2018

1 reference

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Genome organization and long-range regulation of gene expression by enhancers

21 June 2018

1 reference

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The bacterial cytoskeleton: more than twisted filaments

21 June 2018

1 reference

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Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

NIH Image to ImageJ: 25 years of image analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Chromosomes without a 30-nm chromatin fiber

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

A map of nucleosome positions in yeast at base-pair resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Human mitotic chromosome structure: what happened to the 30-nm fibre?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Nucleosomes stacked with aligned dyad axes are found in native compact chromatin in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Cdk1 promotes kinetochore bi-orientation and regulates Cdc20 expression during recovery from spindle checkpoint arrest

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Macromolecular organization of ATP synthase and complex I in whole mitochondria.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Micromanipulator-Assisted Vitreous Cryosectioning and Sample Preparation by High-Pressure Freezing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

The three-dimensional organization of polyribosomes in intact human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Chromatin structure: does the 30-nm fibre exist in vivo?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Improving the technique of vitreous cryo-sectioning for cryo-electron tomography: electrostatic charging for section attachment and implementation of an anti-contamination glove box.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

CTF determination and correction for low dose tomographic tilt series

21 June 2018

1 reference

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Fully automated, sequential tilt-series acquisition with Leginon

21 June 2018

1 reference

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The native 3D organization of bacterial polysomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Mapping in vivo chromatin interactions in yeast suggests an extended chromatin fiber with regional variation in compaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

An improved cryogen for plunge freezing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

A high-resolution atlas of nucleosome occupancy in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

In vivo analysis of chromosome condensation in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Bsoft: image processing and molecular modeling for electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

EMAN2: an extensible image processing suite for electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

EM measurements define the dimensions of the "30-nm" chromatin fiber: evidence for a compact, interdigitated structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Histone H4-K16 acetylation controls chromatin structure and protein interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Cryo-electron microscopy of vitreous sections of native biological cells and tissues

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

UCSF Chimera--a visualization system for exploratory research and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Pre-ribosomes on the road from the nucleolus to the cytoplasm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

High-voltage electron tomography of spindle pole bodies and early mitotic spindles in the yeast Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Dual-axis tomography: an approach with alignment methods that preserve resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Spindle pole body separation in Saccharomyces cerevisiae requires dephosphorylation of the tyrosine 19 residue of Cdc28.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Computer visualization of three-dimensional image data using IMOD

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Selective use of H4 acetylation sites in the yeast Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Chromosome condensation and sister chromatid pairing in budding yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Chromatin fibers observed in situ in frozen hydrated sections. Native fiber diameter is not correlated with nucleosome repeat length

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Three-dimensional ultrastructural analysis of the Saccharomyces cerevisiae mitotic spindle

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

A fiber apparatus in the nucleus of the yeast cell

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Spheroid chromatin units (v bodies).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Cryo-electron microscopy of vitrified chromosomes in situ.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Cryo-electron microscopy of vitrified specimens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Toward a unified model of chromatin folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Solenoidal model for superstructure in chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Electron microscopy of defined lengths of chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Chromatin fibers are formed by heterogeneous groups of nucleosomes in vivo.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

The genome folding mechanism in yeast

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

The molecular architecture of axonemes revealed by cryoelectron tomography.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

Reconstitution of chromatin in vitro

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5170867

The higher order structure of chicken erythrocyte chromosomes in vivo

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27605704

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Exit from Mitosis in Budding Yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27605704

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1091/MBC.E16-07-0506

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27605704%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

PubMed publication ID

27605704

1 reference