Attributes and congruence of three molecular data sets: inferring phylogenies among Septoria-related species from woody perennial plants (Q31041146)

28 June 2017

Attributes and congruence of three molecular data sets: inferring phylogenies among Septoria-related species from woody perennial plants (English)

1 reference

28 June 2017

1 reference

Louis Bernier

3

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Richard C Hamelin

object named as

Richard C Hamelin

series ordinal

2

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author name string

Nicolas Feau

series ordinal

1

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PubMed ID

16707264

28 June 2017

language of work or name

English

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publication date

3 April 2006

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Molecular Phylogenetics and Evolution

28 June 2017

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28 June 2017

40

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28 June 2017

3

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28 June 2017

808-829

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Multiple sources of character information and the phylogeny of Hawaiian drosophilids

28 June 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogenetic utility of different types of molecular data used to infer evolutionary relationships among stalk-eyed flies (Diopsidae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Bias in phylogenetic reconstruction of vertebrate rhodopsin sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Branch Support and Tree Stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Combined data, Bayesian phylogenetics, and the origin of the New Zealand cicada genera

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Taxonomic revision of Septoria-like fungi parasitic on Betulaceae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Assessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the asian pit viper genus, Trimeresurus: separate, simultaneous, and conditional data combination analyses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

DNA sequence, structure, and phylogenetic relationship of the small subunit rRNA coding region of mitochondrial DNA from Podospora anserina.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Can three incongruence tests predict when data should be combined?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

New species of Pseudocercospora and Mycovellosiella, and new combinations into Pseudocercospora and Phaeoramularia

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Noise and Incongruence: Interpreting Results of the Incongruence Length Difference Test

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Reliability of Bayesian Posterior Probabilities and Bootstrap Frequencies in Phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Testing Significance of Incongruence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Specific and sensitive PCR-based detection of Septoria musiva, S. populicola and S. populi, the causes of leaf spot and stem canker on poplars.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Are combined analyses better than single gene phylogenies? A case study using SSU rDNA and rbcL sequence comparisons in the Zygnematophyceae (Streptophyta).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogenetic analysis of cercospora and mycosphaerella based on the internal transcribed spacer region of ribosomal DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, beta-tubulin, and LSU rDNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Inferring complex phylogenies.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Congruence Versus Phylogenetic Accuracy: Revisiting the Incongruence Length Difference Test

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogeny estimation: traditional and Bayesian approaches

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Combining data in phylogenetic analysis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Potential applications and pitfalls of Bayesian inference of phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

A Concern for Evidence and a Phylogenetic Hypothesis of Relationships Among Epicrates (Boidae, Serpentes)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Type I Sts Markers Are More Informative than Cytochrome b in Phylogenetic Reconstruction of the Mustelidae (Mammalia: Carnivora)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

MEGA2: molecular evolutionary genetics analysis software

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

A simple, rapid, and sensitive DNA assay procedure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Uninformative characters and apparent conflict between molecules and morphology.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Variation in modes and rates of evolution in nuclear and mitochondrial ribosomal DNA in the mushroom genus Amanita (Agaricales, Basidiomycota): phylogenetic implications

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

T-Coffee: A novel method for fast and accurate multiple sequence alignment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Bayesian phylogenetic analysis of combined data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

MODELTEST: testing the model of DNA substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Combining multiple data sets in a likelihood analysis: which models are the best?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

A maximum-likelihood analysis of eight phylogenetic markers in gallwasps (Hymenoptera: Cynipidae): implications for insect phylogenetic studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Bayesian inference of character evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Heterogeneity of nucleotide frequencies among evolutionary lineages and phylogenetic inference.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Sylloge fungorum omnium hucusque cognitorum. Digessit P. A. Saccardo.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Congruence and Consensus in the Cotton Tribe (Malvaceae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Amino acid vs. nucleotide characters: challenging preconceived notions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

How Meaningful Are Bayesian Support Values?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogenetic relationships among some cercosporoid anamorphs of Mycosphaerella based on rDNA sequence analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Shared nucleotide composition biases among species and their impact on phylogenetic reconstructions of the Drosophilidae

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogenetic Inference from Restriction Endonuclease Cleavage Site Maps with Particular Reference to the Evolution of Humans and the Apes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Base compositional bias and phylogenetic analyses: a test of the "flying DNA" hypothesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Mycosphaerella punctiformis revisited: morphology, phylogeny, and epitypification of the type species of the genus Mycosphaerella (Dothideales, Ascomycota).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Combining data sets with different phylogenetic histories

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Estimating the pattern of nucleotide substitution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Failure of the ILD to determine data combinability for slow loris phylogeny

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

Inheritance of DNA methylation in Coprinus cinereus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2006.03.029

10.1016/J.YMPEV.2006.03.029

7 January 2021

Identifiers

DOI

1 reference

28 June 2017

1 reference

PubMed ID

16707264