Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes. (Q31076879)

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19 January 2020

title

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes (English)

1 reference

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19 January 2020

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10

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19 January 2020

Samuel O. Oyola

1

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19 January 2020

Thomas D Otto

2

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19 January 2020

Gareth L. Maslen

4

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19 January 2020

Magnus Manske

5

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19 January 2020

Dominic P. Kwiatkowski

9

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19 January 2020

8

Bronwyn Macinnis

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19 January 2020

6

Susana Campino

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19 January 2020

author name string

Yong Gu

3

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19 January 2020

Daniel J Turner

7

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19 January 2020

Michael A Quail

11

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19 January 2020

language of work or name

English

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publication date

3 January 2012

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19 January 2020

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19 January 2020

volume

13

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19 January 2020

page(s)

1

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Linear amplification for deep sequencing

19 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Optimization of protocol for sequencing of difficult templates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

BamView: viewing mapped read alignment data in the context of the reference sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

The Sequence Alignment/Map format and SAMtools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Fast and accurate short read alignment with Burrows-Wheeler transform

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

PlasmoDB: a functional genomic database for malaria parasites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

DNA detection using recombination proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Genome sequence of the human malaria parasite Plasmodium falciparum

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Artemis: sequence visualization and annotation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

Low concentrations of tetramethylammonium chloride increase yield and specificity of PCR

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312816

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-1

21 January 2018

Identifiers

DOI

10.1186/1471-2164-13-1

1 reference

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Dimensions Publication ID

19 January 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-13-1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22214261%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

22214261

1 reference